Issues
- 0
add filter rules for trimmomatic path
#36 opened by sroener - 0
- 1
Improve read groups with preprocessing markers
#20 opened by sroener - 1
- 1
add plots for readlength distributions
#15 opened by sroener - 1
option for bam or fastQ files as inputs
#14 opened by sroener - 1
Add option to do the GC correction
#12 opened by sroener - 1
Add post alignment QC step
#7 opened by sroener - 1
- 1
separate pre alignmend QC step
#4 opened by sroener - 1
Combine information in snakemake report
#5 opened by sroener - 1
Add proper config validation steps
#6 opened by sroener - 1
Create visualizations for documenting Workflow
#13 opened by sroener - 1
example dataset to check the functionality
#16 opened by sroener - 0
- 0
Add option to use merged reads only
#10 opened by sroener - 0
update mapping algorithm (BWA mem 2)
#8 opened by sroener - 0
- 0
- 0
- 0
make configs portable
#2 opened by sroener