ladyjkalx

ladyjkalx's Stars

• satijalab/seurat

  R toolkit for single cell genomics

  Language:R2.2k737.9k902

• YuLab-SMU/clusterProfiler

  :bar_chart: A universal enrichment tool for interpreting omics data

  Language:R1k45634252

• crazyhottommy/RNA-seq-analysis

  RNAseq analysis notes from Ming Tang

  Language:Python883787295

• nf-core/rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Language:Nextflow864151640692

• twbattaglia/RNAseq-workflow

  A repository for setting up a RNAseq workflow

  Language:R402273182

• sortmerna/sortmerna

  SortMeRNA: next-generation sequence filtering and alignment tool

  Language:C++2401431368

• neufeld/pandaseq

  PAired-eND Assembler for DNA sequences

  Language:C129148024

• immunogenomics/symphony

  Efficient and precise single-cell reference atlas mapping with Symphony

  Language:Jupyter Notebook95164822

• bedapub/besca

  BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis

  Language:Python491011316

• ewels/nf-core-rnaseq

  See the main fork of this repository here >>>

  Language:Nextflow38804

• cit-bioinfo/BLCAsubtyping

  Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie, TCGA

  Language:R24427

• heike/gglogo

  R package for creating sequence logo plots

  Language:R212113

• kevlitchfield1/CPI1000_paper

  Language:R204212

• PathwayCommons/chibe

  Pathway visualization and analysis tool for Pathway Commons and other BioPAX data

  Language:Java13127210

• Humanitas-Danese-s-omics/ibd-meta-analysis-data

  95

• nyuhuyang/scRNAseq-BladderCancer

  Collaboration with David Mulholland at Mount Sinai for invasive Bladder Cancer

  Language:R7216

• d-feng/SingleCellExplorer

  Language:JavaScript51

• Hurricaner1989/dwgLASSO-R-codes

  R code implementing dwgLASSO algorithm from Zuo et. al.'s BMC Bioinformatics paper (Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSO)

  Language:R5403

• csgroen/classifyT1BC

  Classification of T1 Bladder Cancer

  Language:R1240