derfinderData
Data package for derfinder and derfinderPlot examples.
Documentation
For more information about derfinderData
check the vignettes through
Bioconductor or at the
documentation website.
Installation instructions
Get the latest stable R
release from
CRAN. Then install derfinderData
from
Bioconductor using the following code:
if (!requireNamespace("BiocManager", quietly = TRUE)) {
install.packages("BiocManager")
}
BiocManager::install("derfinderData")
Citation
Below is the citation output from using citation('derfinderData')
in
R. Please run this yourself to check for any updates on how to cite
derfinderData.
print(citation("derfinderData"), bibtex = TRUE)
#> To cite package 'derfinderData' in publications use:
#>
#> Collado-Torres L, Jaffe A, Leek J (2021). _derfinderData: Processed
#> BigWigs from BrainSpan for examples_. R package version 2.19.0,
#> <https://github.com/leekgroup/derfinderData>.
#>
#> A BibTeX entry for LaTeX users is
#>
#> @Manual{,
#> title = {derfinderData: Processed BigWigs from BrainSpan for examples},
#> author = {Leonardo Collado-Torres and Andrew Jaffe and Jeffrey Leek},
#> year = {2021},
#> note = {R package version 2.19.0},
#> url = {https://github.com/leekgroup/derfinderData},
#> }
Please note that the derfinderData
was only made possible thanks to
many other R and bioinformatics software authors, which are cited either
in the vignettes and/or the paper(s) describing this package.
Code of Conduct
Please note that the derfinderData project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.
Development tools
- Continuous code testing is possible thanks to GitHub actions through usethis, remotes, sysreqs and rcmdcheck customized to use Bioconductor’s docker containers and BiocCheck.
- Code coverage assessment is possible thanks to codecov and covr.
- The documentation website is automatically updated thanks to pkgdown.
- The code is styled automatically thanks to styler.
- The documentation is formatted thanks to devtools and roxygen2.
For more details, check the dev
directory.
This package was developed using biocthis.