Pinned Repositories
DeconPeaker
a deconvolution model to identify cell types based on chromatin accessibility in ATAC-Seq data of mixture samples
Thymus
Unraveling the spatial organization and development of human thymocytes through integration of spatial transcriptomics and single-cell multi-omics profiling
LinDeconSeq
Cell Type Deconvolution using gene expression data for bulk samples.
Cell2Spatial
Precisely deciphering spatial transcriptomic spots at single-cell granularity.
Cell2Spatial.Reproduce
Cell2Spatial Reproduction Analysis Code
OncoSig
Oncogenic Signaling Pathway-related lncRNA for predicting prognosis and immunotherapy response in breast cancer
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
VistoSeg
Image processing pipeline for spatial projects
BertTCR
A deep learning framework for cancer-related immune status prediction using TCR repertoire data
BioinfoAPI
lihuamei's Repositories
lihuamei/LinDeconSeq
Cell Type Deconvolution using gene expression data for bulk samples.
lihuamei/Thymus
Unraveling the spatial organization and development of human thymocytes through integration of spatial transcriptomics and single-cell multi-omics profiling
lihuamei/Cell2Spatial
Precisely deciphering spatial transcriptomic spots at single-cell granularity.
lihuamei/Cell2Spatial.Reproduce
Cell2Spatial Reproduction Analysis Code
lihuamei/DeconPeaker
a deconvolution model to identify cell types based on chromatin accessibility in ATAC-Seq data of mixture samples
lihuamei/OncoSig
Oncogenic Signaling Pathway-related lncRNA for predicting prognosis and immunotherapy response in breast cancer