lilab-bcb/cirrocumulus

statistical test

Closed this issue · 4 comments

SNOL2 commented

Hello, thanks for this great project!
I was wondering can we perform statistical test between different group?
Thanks in advance!

Please search for "differential expression" at https://cirrocumulus.readthedocs.io/en/latest/documentation.html

SNOL2 commented

I may not have expressed it clearly. I hope to perform statistical tests on specific genes in two groups (and display them on a violin plot if possible).

Currently, the differential expression test is performed using all genes. You can display violin plots independently of differential expression results using the distributions tab - https://cirrocumulus.readthedocs.io/en/latest/documentation.html#distributions.

SNOL2 commented

Currently, the differential expression test is performed using all genes. You can display violin plots independently of differential expression results using the distributions tab - https://cirrocumulus.readthedocs.io/en/latest/documentation.html#distributions.

got it. Thanks!