lilab-bcb/cirrocumulus

Issues

• Overlaying H&E stained images with CosMx data

  #217 opened 6 months ago by gohantsubu
  4

• scale bar

  #215 opened 7 months ago by scseeman
  0

• The package is not up-to-date

  #212 opened 7 months ago by ShuonanChen
  1

• Static website online dataset

  #211 opened a year ago by worsteggs
  2

• [cirro-server] open dataset from url path

  #210 opened a year ago by yuhuyoyo
  6

• Is it possible to limit user operations?

  #209 opened a year ago by QqQss
  1

• ImportError: cannot import name 'Index1D' from 'anndata.compat'

  #208 opened a year ago by anishchakka
  1

• Viewing the visit history of the website

  #207 opened a year ago by SNOL2
  1

• can not start this project with webstorm IDE

  #202 opened 2 years ago by honghh2018
  1

• Displaying partial data seperately in the Embeddings interface.

  #196 opened 2 years ago by SNOL2
  2

• Static Website on Google App Engine and Cloud Storage

  #195 opened 2 years ago by officialprofile
  8

• new users for static website

  #194 opened 2 years ago by BIGZijianLi
  0

• spots not shown correctly for my Visium data

  #193 opened 2 years ago by zglu
  5

• Paste feature list

  #188 opened 2 years ago by SNOL2
  2

• statistical test

  #182 opened 2 years ago by SNOL2
  4

• display multiple Visium datasets on top of H&E images

  #181 opened 2 years ago by zglu
  9

• .htaccess possible ?

  #168 opened 2 years ago by colindaven
  1

• visualize seurat(RDS format) with cirrocumulus

  #177 opened 2 years ago by wang0430
  1

• select doesn't work on static website -- loading

  #173 opened 2 years ago by zglu
  2

• failed to use custom color range in heatmap

  #170 opened 2 years ago by SNOL2
  1

• Does not support multiple selections for spatial transcriptomics data.

  #157 opened 2 years ago by eleozzr
  2

• "Unable to retrieve datasets" error for Static Website server method

  #70 opened 2 years ago by jwtobias
  9

• support IE browser

  #80 opened 3 years ago by csmartj
  1

• unable to sign in after deploying <gcloud app deploy app.yaml --project=<PROJECT>>

  #140 opened 3 years ago by MubasherMohammed
  2

• add support for layers in AnnData objects

  #78 opened 3 years ago by jkanche
  14

• Failure to load data when a manual color is set for a category whose index is over 40

  #124 opened 3 years ago by gouwens
  2

• Breaking changes with latest release of Werkzeug (2.1.0)

  #120 opened 3 years ago by romanhaa
  1

• dataset attributes in static website mode

  #115 opened 3 years ago by zhangguy
  1

• Right click event ignored

  #18 opened 3 years ago by flying-sheep
  0

• Antialiasing cells in main canvas

  #19 opened 3 years ago by flying-sheep
  0

• Legend has no background

  #20 opened 3 years ago by flying-sheep
  0

• Links hard to read in dark mode

  #21 opened 3 years ago by flying-sheep
  0

• support change the selected ids to new category and add a new cluster to anndata.obs

  #99 opened 3 years ago by ditannan
  5

• Documentation for TileDB

  #32 opened 3 years ago by jkanche
  1

• new users for serve mode

  #77 opened 3 years ago by zhangguy
  6

• Login button missing

  #72 opened 3 years ago by jwtobias
  1

• Differential Expression not running with lassoed selections

  #73 opened 3 years ago by jwtobias
  1

• __lock.tdb file no found

  #67 opened 4 years ago by csmartj
  2

• MongoDB question

  #16 opened 4 years ago by dl016d
  3

• "No matching index found" error when attempting to open a dataset with Google App Engine hosted cirrocumulus

  #29 opened 4 years ago by ianno-s
  1

• Minimize insets

  #14 opened 4 years ago by chsher
  8

• How to set up customized ip address?

  #10 opened 4 years ago by iiiir
  5

• how to run multiple dataset?

  #13 opened 4 years ago by iiiir
  1

• Loading dataset - Google cloud server

  #12 opened 4 years ago by kaplinserm
  5

• Error while running example

  #11 opened 5 years ago by parashardhapola
  1