ludvb/xfuse

Issues

• Missing h5 file question

  #81 opened 4 months ago by almas2019
  0

• RuntimeError: Annotation layer "" is missing

  #80 opened 4 months ago by younng367
  1

• RuntimeError: CUDA error: no kernel image is available for execution on the device

  #79 opened 5 months ago by MingyuYang-Yale
  2

• Trained model

  #57 opened 2 years ago by chenhcs
  3

• About mouse olfactory bulb dataset

  #48 opened 3 years ago by cquzys
  2

• Customizing Training Procedure

  #78 opened a year ago by romankouz
  0

• How to predict expression from histology in unseen samples? What specific input and configuration files should be prepared？

  #77 opened a year ago by pangkun97
  0

• How do I make a tissue mask (with photoshop?)

  #73 opened a year ago by NicolaasVanRenne
  4

• Is it possible for Gene_maps values to use the same scale instead of min-max per gene?

  #72 opened a year ago by NicolaasVanRenne
  3

• TypeError: cannot pickle 'weakref' object related to save_session

  #76 opened a year ago by Yizhi-Zhang
  2

• Installation of xfuse

  #75 opened a year ago by cathalgking
  11

• What is the minimum of sample to train a model on?

  #74 opened a year ago by NicolaasVanRenne
  1

• When is my model fully trained?

  #71 opened a year ago by NicolaasVanRenne
  9

• Which results to look at?

  #39 opened 3 years ago by jianhuupenn
  8

• Tissue masking failed

  #54 opened 2 years ago by simonmfr
  5

• ModuleNotFoundError: No module named 'xfuse'

  #70 opened a year ago by NicolaasVanRenne
  12

• prediction of spatial gene expression

  #69 opened a year ago by althefirst99
  0

• Runtime error related to tensor size when running "analysis-gene_maps"

  #68 opened 2 years ago by fuerzhou
  4

• xfuse with black and white image

  #59 opened 2 years ago by simonmfr
  1

• Error: ValueError: The parameter loc has invalid values

  #61 opened 2 years ago by asifajrof
  1

• License?

  #62 opened 2 years ago by csho33
  1

• AttributeError: 'DataLoader' object has no attribute 'reset_workers'

  #65 opened 2 years ago by wzr0108
  1

• In silico spatial transcriptomics

  #67 opened 2 years ago by gaole2019
  1

• Error when Running with Windows

  #63 opened 2 years ago by mattobny
  1

• error when installing

  #64 opened 2 years ago by wzr0108
  0

• xfuse on Visium data

  #10 opened 4 years ago by alikhuseynov
  21

• Docker image

  #52 opened 2 years ago by simonmfr
  1

• Error running xfuse

  #56 opened 2 years ago by archieenninful
  1

• installation problem: setup.py not found?

  #50 opened 2 years ago by NicolaasVanRenne
  1

• Decoding error in data preprocessing

  #47 opened 3 years ago by yunong-xia
  1

• Visium: Failed to mask tissue

  #33 opened 3 years ago by iaaaka
  9

• Visualization scheme for gene maps

  #41 opened 3 years ago by angadps
  7

• purge_interval for metagene expansion not working

  #45 opened 3 years ago by xinyiz98
  2

• xfuse on synthetic data

  #40 opened 3 years ago by Yizhi-Zhang
  3

• Annotation file

  #3 opened 5 years ago by mssanjavickovic
  10

• The parameter v has invalid values

  #36 opened 3 years ago by jianhuupenn
  2

• Is xfuse an executable program?

  #37 opened 3 years ago by Svvord
  0

• xfuse not found after installing

  #34 opened 3 years ago by JunMa11
  3

• Memory issue

  #32 opened 3 years ago by TangLabsysu2020
  3

• Use Xfuse in Windows

  #30 opened 3 years ago by Yao-14
  5

• How to use masks?

  #17 opened 4 years ago by LucaMarconato
  1

• TensordBoard related error at epoch 500

  #14 opened 4 years ago by LucaMarconato
  2

• Train on multiple GPU

  #12 opened 4 years ago by theophilefro
  18