mainharryHR

Pinned Repositories

• monocle3

  Language:R33321642100

• SoupX

  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data

  Language:R257614734

• cytotrace2

  CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

  Language:R894346

• miloR

  R package implementation of Milo for testing for differential abundance in KNN graphs

  Language:R341924422

• scRepertoire

  A toolkit for single-cell immune profiling

  Language:R3061334952

• rstudio

  RStudio is an integrated development environment (IDE) for R

  Language:Java4.7k2399k1.1k

• liana

  LIANA: a LIgand-receptor ANalysis frAmework

  Language:R179916132

• pertpy

  Perturbation Analysis in the scverse ecosystem.

  Language:Python132423920

• cellrank

  CellRank: dynamics from multi-view single-cell data

  Language:Python344871646

• scCODA

  A Bayesian model for compositional single-cell data analysis

  Language:Jupyter Notebook14899024

mainharryHR's Repositories