malnirav's Stars
sindresorhus/quick-look-plugins
List of useful Quick Look plugins for developers
IndrajeetPatil/ggstatsplot
Enhancing {ggplot2} plots with statistical analysis 📊📣
nanxstats/awesome-shiny-extensions
🐝 Awesome R and Python packages offering extended UI or server components for the web framework Shiny
tilfinltd/aws-extend-switch-roles
Extend your AWS IAM switching roles by Chrome extension, Firefox add-on, or Edge add-on
hms-dbmi/UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
DiskFrame/disk.frame
Fast Disk-Based Parallelized Data Manipulation Framework for Larger-than-RAM Data
datalad/datalad
Keep code, data, containers under control with git and git-annex
nextflow-io/patterns
A curated collection of Nextflow implementation patterns
Azure/Microsoft365R
R SDK for interacting with Microsoft 365 APIs
luntergroup/octopus
Bayesian haplotype-based mutation calling
amplab/snap
Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
biocommons/hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
aws-samples/data-engineering-for-aws-immersion-day
Lab Instructions for Data Engineering Immersion Day
Illumina/Nirvana
The nimble & robust variant annotator
raerose01/deconstructSigs
deconstructSigs
ChristofferFlensburg/superFreq
Analysis pipeline for cancer sequencing data
caleblareau/mgatk
mgatk: mitochondrial genome analysis toolkit
GeneDx/pgr-tk
PGR-TK: Pangenome Research Tool Kit
Illumina/PlatinumGenomes
The Platinum Genomes Truthset
RamiKrispin/MLstudio
The ML Studio Package
danrlu/nextflow_cheatsheet
Tips for Nextflow and cheatsheet for channel operation
czbiohub-sf/cerebra
A tool for fast and accurate summarizing of variant calling format (VCF) files
waldronlab/HGNChelper
Identify and correct invalid gene symbols
RamiKrispin/Hands-On-Time-Series-Analysis-with-R
Hands-On-Time-Series-Analysis-with-R
stemangiola/nanny
A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and variable features.
chi2labs/cognitoR
CognitoR provides easy integration of Shiny with AWS Cognito Authentication.
cgab-ncc/FIREVAT
FInding REliable Variants without ArTifacts
bioinform/ecTMB
grailbio/doppelmark
NGS duplicate marking
js2264/periodicDNA
periodicDNA R package