marcodelapierre

Computational scientist, supercomputing specialist, educator, data enthusiast 🏳️‍🌈

https://hpcnow.com/Perth, Noongar Boodja, Australia

Pinned Repositories

md-dockerfiles
My Dockerfiles
Language:Dockerfile1 2 11
md-nextflow-pipelines
Meta-repository: collection of my Nextflow pipelines
1 1 00
nanopore-nf
Nanopore pipeline for DPIRD - uses Nextflow
Language:Nextflow2 1 03
quantum-play
Early experiments with various Quantum Computing frameworks
Language:Jupyter Notebook2 1 02
toy-acacia-nf
Toy pipeline to test Nextflow with Acacia (S3 Object Storage) at Pawsey
Language:Nextflow2 1 00
trinity-nf
Trinity assembly pipeline for BioCommons / USydney Informatics Hub - Nextflow porting
Language:Nextflow3 3 10
pawsey-containers
A collection of Dockerfiles and Singularity deffiles for Pawsey-supported images
Language:C++16 11 312
pawsey-spack-config
Automated deployment system for the scientific software stack in use at Pawsey
Language:Python4 10 559
singularity-containers
Webinars&Tutorial on Containers on HPC and Cloud with Singularity
Language:Python26 12 16
singularity-hpc
Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.
Language:Python114 7 15127