mattoslmp
Computational and Systems Biologist PhD from Fiocruz, Brazil - RJ
Computational and System BiologistBrazil
Pinned Repositories
16S-ITGDB
An integrated database for improving taxonomic classification of 16S Ribosomal RNA sequences.
add-tax-pred_metagenome_contrib_Picrust2
AgenticAGI
Advanced Strawberry Logic for All LLMs
AgentLite
annie
annie = ANNotation Information Extractor
Annotation-genome-graphics
R scripts for genome annotation graphs
Cancer-transcriptomics
mattoslmp.github.io
Microbiota-MetaAnalyser
Microbiota Coral 16S MetaAnalyser
primrose
Predict 5mC in PacBio HiFi reads
mattoslmp's Repositories
mattoslmp/annie
annie = ANNotation Information Extractor
mattoslmp/BaseMod-3.0
mattoslmp/bioinformatics_pipeline_with_snakemake_2019-06-27
Intro to snakemake for bioinformatics - WestGrid Research Computing Summer School 2019 - University of British Columbia
mattoslmp/ChemBLAST
Find similar molecules using Sequence BLAST algorithm
mattoslmp/ClusterFinder
Predicting biosynthetic gene clusters in genomes
mattoslmp/longitudinal-notebooks
mattoslmp/metagenomic-binning-comparison
An attempt to benchmark taxonomic independent metagenomic binning tools
mattoslmp/nw_leafnames
Rename external nodes (leaves) in a newick tree
mattoslmp/python_scripts
mattoslmp/tutorials
In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given that you give proper credit. Have fun!