Issues
- 5
Issue: No Rendered Output When Following MICOM Documentation for Constraint-Based Modeling
#182 opened by wtscott31 - 2
Hybrid solver broken for numpy 2.0+
#187 opened by shalabs - 2
[MICOM 1.0 API] Proposed new format for fluxes
#34 opened by cdiener - 1
saving intermediate output from "grow"
#181 opened by zoey-rw - 1
- 4
Possible Bug in `com.knockout_taxa()`
#172 opened by alejandrocs98 - 0
Switch the multiprocessing default method to spawn
#166 opened by cdiener - 4
"build" step stalling at 99% complete
#165 opened by zoey-rw - 3
- 0
Update and fix the docs
#43 opened by cdiener - 2
- 1
- 1
Documentation and default parameters do not match for micom.workflows.grow.grow
#120 opened by cdiener - 2
keyerror: '_gpr' when using 'load_pickle'
#121 opened by Rotembartuv - 8
Support for GTDB taxonomy?
#36 opened by nick-youngblut - 0
Support the `.sbml` extensions for SBML files
#131 opened by cdiener - 0
Adding coupling constraint to a coupling model
#91 opened by Ilhem36 - 2
Error while copying model using model.copy()
#72 opened by cdiener - 3
Adjust active demands when loading models
#56 opened by cdiener - 1
- 4
- 1
Mention and link where to ask questions
#14 opened by cdiener - 6
- 3
build.py:177: FutureWarning: The default value of regex will change from True to False in a future version.
#32 opened by mmp3 - 1
Workflows are broken with Gurobi
#24 opened by cdiener - 1
- 6
optimize_all(fluxes=True) and optimize_single(fluxes=True) do not return fluxes
#33 opened by michaelsilverstein - 3
"Metrics are only available for models build using a model database" when using custom SBML files
#31 opened by mmp3 - 5
Fraction variation influences "status"
#29 opened by arianccbasile - 0
Implement more checks and help for model tables
#26 opened by cdiener - 3
- 2
- 4
- 2
Export optcom results
#10 opened by arianccbasile - 4
- 1
Question on setting import flux upper bounds
#6 opened by krcurtis - 14
- 2
- 0
Should warn about mismatched IDs
#7 opened by cdiener - 3
Issue importing
#4 opened by arianccbasile - 1
Question on units for media fluxes
#5 opened by krcurtis - 5
- 3