misshie

misshie's Stars

• marbl/CHM13

  The complete sequence of a human genome

  908689498

• caxlsx/caxlsx

  xlsx generation with charts, images, automated column width, customizable styles and full schema validation. Axlsx excels at helping you generate beautiful Office Open XML Spreadsheet documents without having to understand the entire ECMA specification. Check out the README for some examples of how easy it is. Best of all, you can validate your xlsx file before serialization so you know for sure that anything generated is going to load on your client's machine.

  Language:Ruby49614133124

• nanoporetech/dorado

  Oxford Nanopore's Basecaller

  Language:C++491321k59

• Illumina/SpliceAI

  A deep learning-based tool to identify splice variants

  Language:Python40021138158

• mxmlnkn/rapidgzip

  Gzip Decompression and Random Access for Modern Multi-Core Machines

  Language:C++3637437

• HewlettPackard/swarm-learning

  A simplified library for decentralized, privacy preserving machine learning

  Language:Python32821118100

• brentp/slivar

  genetic variant expressions, annotation, and filtering for great good.

  Language:Nim2481116023

• weizhouUMICH/SAIGE

  Language:R1891342473

• dnanexus-rnd/GLnexus

  Scalable gVCF merging and joint variant calling for population sequencing projects

  Language:C++1451514338

• brentp/echtvar

  using all the bits for echt rapid variant annotation and filtering

  Language:Rust1404289

• nanoporetech/modkit

  A bioinformatics tool for working with modified bases

  Language:Rust136132667

• yupenghe/methylpy

  WGBS/NOMe-seq Data Processing & Differential Methylation Analysis

  Language:Python13358948

• informationsea/transanno

  accurate LiftOver tool for new genome assemblies

  Language:Rust1065911

• Shuhua-Group/Chinese-Pangenome-Consortium-Phase-I

  Language:Shell622310

• abscondment/statistics2

  Shin-ichiro Hara's library, updated for Ruby 1.9 & packaged as a gem.

  Language:Ruby594413

• telatin/bamtocov

  🏔 coverage extraction from BAM/CRAM files, supporting targets 📊  

  Language:Nim593126

• tseemann/samclip

  Filter SAM file for soft and hard clipped alignments

  Language:Perl4631710

• evanlinde/xrdp-who

  See who is logged in with xrdp

  Language:Shell33317

• gagneurlab/absplice

  Language:Python337164

• mulinlab/VarNote

  Fast and scalable variant annotation tool

  Language:Java30269

• lorrainea/MARS

  MARS: improving Multiple circular sequence Alignment using Refined Sequences

  Language:C++272129

• kojix2/chatgpt-cli

  Yet another ChatGPT command line tool

  Language:Crystal255171

• b-brankovics/fasta_tools

  This package contains Perl programs/scripts that perform frequently needed operations on FASTA format files.

  Language:Perl15404

• KatherLab/swarm-learning-hpe

  Experimental repo for Odelia project based on HPE platform. This repo contains multiple models for histopathology and radiology training.

  Language:Python125481

• ncc-gap/GCATWorkflow

  Language:Python71

• dbcls/bh24

  3700

• bitsyamagu/jnord

  Java version of Nord (Target CNV detection)

  Language:Java2

• dbcls/visc

  Variant Information Standardization Collegium #1

  Language:Ruby2141

• atsushihijikata/unmet-igv

  IGV session for UNMET score

  10

• kojix2/bio-twobit

  A ruby library for accessing 2bit files

  Language:Ruby1211