mkandziora/PhylUp
PhylUp - a python package to automatically generate alignments (or update alignments and phylogenies) using local sequences or a local Genbank database while controlling for the number of sequences per OTU.
Python
Issues
- 1
test failure (test_reconcile.py)
#26 opened by josephwb - 0
config files
#17 opened by josephwb - 2
example_different_levels problems
#19 opened by josephwb - 2
Question: do input sequences need to be aligned?
#24 opened by josephwb - 9
update_databases fails
#18 opened by josephwb - 2
peer code review?
#22 opened by josephwb - 2
warning with example_unpublished
#23 opened by josephwb - 3
example_concat failure
#16 opened by josephwb - 0
add run_modeltest option for tree calculation
#20 opened by mkandziora - 1
example_analysis.py failure
#14 opened by josephwb - 3
taxonomic rank database question
#12 opened by josephwb - 2
Checking blastdb error
#11 opened by josephwb - 5
Cannot download blastdb (404, wildcards)
#10 opened by josephwb