Pinned Repositories
awesome-rna-3D-tools
awesome tools for RNA
emacs-grammarly
an Emacs extension to send a text to/from Grammarly
emacs-pdb-mode
pdb-mode is an emacs-lisp minor mode for Emacs to perform a number of useful editing functions on Protein DataBank (PDB) formatted files. XEmacs and/or GNU Emacs are available for most computing platforms.
EmacsOrgModeClockingXBar
see what you are working on with XBar, Conky ;-) [if using emacs/orgmode/clocking] + alternatives
EvoClustRNA
RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io
geekbook
G33KB00K3 - fun to read & fun to write -- 🤓 eXtreme eXtendable note taking system for nerds/geeks (including scientists!) docs: http://geekbook.rtfd.io = beautiful html generator of your markdown-based notes
orgmode-capture-all
Capture ALL (with a right click) to OrgMode Inbox
Pocket-Plus-Calibre-Plugin
📚 Modified version of the Calibre plugin for Pocket. Now, you get your articles organized by your Pocket tags, and more!
pubmex
get full paper names for downloaded publications automatically
rna-tools
🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online
mmagnus's Repositories
mmagnus/Pocket-Plus-Calibre-Plugin
📚 Modified version of the Calibre plugin for Pocket. Now, you get your articles organized by your Pocket tags, and more!
mmagnus/rna-tools
🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online
mmagnus/geekbook
G33KB00K3 - fun to read & fun to write -- 🤓 eXtreme eXtendable note taking system for nerds/geeks (including scientists!) docs: http://geekbook.rtfd.io = beautiful html generator of your markdown-based notes
mmagnus/pubmex
get full paper names for downloaded publications automatically
mmagnus/awesome-rna-3D-tools
awesome tools for RNA
mmagnus/emacs-pdb-mode
pdb-mode is an emacs-lisp minor mode for Emacs to perform a number of useful editing functions on Protein DataBank (PDB) formatted files. XEmacs and/or GNU Emacs are available for most computing platforms.
mmagnus/EvoClustRNA
RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io
mmagnus/EmacsOrgModeClockingXBar
see what you are working on with XBar, Conky ;-) [if using emacs/orgmode/clocking] + alternatives
mmagnus/RNA-Structural-Bioinformatics-Crash-Course
RNA Structural Bioinformatics Crash Course & Data Science in Python
mmagnus/RNA-Puzzles-Standardized-Submissions
Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip
mmagnus/emacs-env
I've been using Emacs for over 17 (since 2007) years now. This's my config file :-) it might be useful for someone. http://mmagnus.github.io/emacs-env/
mmagnus/orgmode-capture-all
Capture ALL (with a right click) to OrgMode Inbox
mmagnus/PocketX-Calibre-Plugin
PocketX-Calibre-Plugin is an experimental version of Pocket-Plus-Calibre-Plugin (send articles from Pocket to your e-reader)
mmagnus/boox-wifi-mount-sync
boox-wifi-mount-sync - sync or mount your Boox device over WiFi
mmagnus/PyMOL4Spliceosome
Structures of the spliceosome processed to be easily viewed with PyMOL
mmagnus/yeast-spotifier
spotifier - a script to process yeast plate images into figures, without fancy Deep Learning ;-) (yet)
mmagnus/borg-search
Tools search borg archives/repos (also to search big files to remove them)
mmagnus/rna3db
A dataset for training and benchmarking deep learning models for RNA structure prediction
mmagnus/samochodoza
mmagnus/biopython
Official git repository for Biopython (originally converted from CVS)
mmagnus/emacs-orgmode-tracking
mmagnus/fmalmeida
mmagnus/gnome-shell-simple-message
Write message on top bar with dconf
mmagnus/homebrew-bio
:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
mmagnus/mmagnus
mmagnus/mmagnus.github.io
https://mmagnus.github.io
mmagnus/notes
mmagnus/OpenComplex
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
mmagnus/PyMOL4Ribosome
PyMOL4Ribosome
mmagnus/RNA-Puzzles-toolkit-overview
RNA-Puzzles-toolkit-overview