nipreps/nirodents

Issues

• problem with 3d mouse brain extraction

  #62 opened a year ago by esther1262
  4

• Move deployment to GH actions

  #61 opened 2 years ago by oesteban
  0

• Masking mouse brains

  #43 opened 4 years ago by araikes
  14

• specify input_image requires absolute path

  #46 opened 3 years ago by grandjeanlab
  0

• Scripts to run comparison on Sherlock

  #8 opened 3 years ago by oesteban
  1

• running nirodents on ubuntu

  #50 opened 3 years ago by eriktaylor
  2

• unused gaussian_filter function?

  #39 opened 4 years ago by eilidhmacnicol
  0

• Rodent T2w preprocessing: brain extraction

  #2 opened 5 years ago by oesteban
  0

• Script to run ``artsBrainExtraction`` on all our rats

  #11 opened 5 years ago by oesteban
  1

• rodent_brain_extraction_wf is not a directed acyclic graph (DAG)

  #28 opened 5 years ago by oesteban
  1

• Wrong mask being called from template flow

  #24 opened 5 years ago by eilidhmacnicol
  1

• Rodent T2w preprocessing: calculate T2w template and validate headers

  #1 opened 5 years ago by oesteban
  1

• Add a smoke test on CircleCI

  #15 opened 5 years ago by oesteban
  1

• Pacify flake8

  #14 opened 5 years ago by oesteban
  1

• ResampleImageBySpacing unintended outputs

  #21 opened 5 years ago by eilidhmacnicol
  0

• Generate a mosaic view, given the target image and the mask

  #9 opened 5 years ago by oesteban
  2

• Basic CI configuration

  #6 opened 5 years ago by oesteban
  0

• Containers

  #12 opened 5 years ago by eilidhmacnicol
  0

• Write down evaluation protocol into draft

  #10 opened 5 years ago by oesteban
  1

• Cut a new release to test CI/CD

  #7 opened 5 years ago by oesteban
  0

• Rodent T2w preprocessing: brain tissue segmentation

  #3 opened 6 years ago by oesteban
  0