nipy/mindboggle

Issues

• Some Mindboggle-101 dataset v3 labels.DKT31.manual+aseg.MNI152.nii.gz files contain labels 1000, 2000, 1001, 2001, 1032, 2032, 1033, and 2033

  #214 opened 2 years ago by br-cpvc
  2

• How to reconstruct the shape form Zernike moments extracted from the original shape

  #167 opened 6 years ago by valorv
  1

• Difference between DKT40 and DKT31 OASIS?

  #215 opened 2 years ago by WNZhao1988
  3

• running error

  #213 opened 2 years ago by MarioXu
  1

• visualization of eigenfunctions in laplace-beltrami operator

  #194 opened 3 years ago by Pulkit-Khandelwal
  1

• Which file should be selected as the result of freesurfer automatic segmentation?

  #212 opened 3 years ago by tanjia123456
  0

• in singularity cannot execute binary file: Exec format error

  #211 opened 4 years ago by rsiugzda
  3

• datasets update

  #206 opened 4 years ago by tanjia123456
  2

• 📌 Pin versions of dependencies

  #208 opened 4 years ago by shnizzedy
  0

• Importing mindboggle

  #207 opened 4 years ago by butellyn
  1

• OASIS-TRT-20-1 appears can't allocate memory in mindboggle dataset

  #205 opened 4 years ago by tanjia123456
  0

• runing error

  #204 opened 4 years ago by tanjia123456
  13

• where to download the source data ?

  #203 opened 4 years ago by tanjia123456
  5

• Data error

  #202 opened 4 years ago by tanjia123456
  2

• how to install mindboggle package?

  #201 opened 4 years ago by tanjia123456
  4

• Mindboggle runtime error

  #197 opened 4 years ago by xiaoninh
  1

• New UnicodeEncodeError in pipeline (--thickinthehead)

  #200 opened 5 years ago by DMAlessandro
  1

• Mindboggle as node of nipype pipeline

  #198 opened 5 years ago by DMAlessandro
  4

• Shape table moments - how are they calculated?

  #199 opened 5 years ago by jling-NM
  2

• MIndboggle (latest) crashing on processing freesurfer 6 data

  #196 opened 5 years ago by cecs1
  7

• mindboggle looking for /mri/orig/001.mgz when /mri/T1.mgz is more appropriate for longitudinal FreeSurfer data?

  #195 opened 5 years ago by jling-NM
  0

• release version different from internal version; circleci tests failing because nipype printing out a message

  #185 opened 5 years ago by satra
  7

• plotting surfaces in jupyter notebook tutorial broken

  #177 opened 6 years ago by binarybottle
  14

• running example Error: Node Shape_tables.a1 failed to run on host xxx && UnicodeEncodeError

  #190 opened 5 years ago by locta66
  19

• tutorial on mybinder

  #191 opened 5 years ago by PeerHerholz
  4

• add/provide Singularity image

  #192 opened 5 years ago by PeerHerholz
  3

• header orientation direction data incorrect for 14/101 subjects in the Mindboggle-101 dataset

  #186 opened 5 years ago by kinland
  1

• "Shape_tables.a1 failed to run on host" error running on mindboggle_input_example

  #188 opened 5 years ago by jling-NM
  3

• Basal Forebrain labels

  #189 opened 5 years ago by stnava
  1

• Trouble setting environment variables

  #169 opened 6 years ago by g-a-t
  5

• mindboggle docker installation problem

  #168 opened 6 years ago by SHJDwu
  8

• docker run command results in "Permission denied" error

  #178 opened 6 years ago by binarybottle
  2

• Minimal, maximal and Gaussian curvatures are the same and wrong

  #182 opened 6 years ago by kalemaria
  10

• Unreadable Notebook - NotJSONError

  #181 opened 6 years ago by kalemaria
  4

• ROYGBIV viewer not loading data

  #173 opened 6 years ago by binarybottle
  1

• UnicodeEncodeError: 'ascii' codec can't encode character '\u2019'

  #175 opened 6 years ago by binarybottle
  1

• Error re: DATA argument

  #179 opened 6 years ago by g-a-t
  1

• non-default curvature files improperly named

  #180 opened 6 years ago by binarybottle
  0

• ERROR: FreeSurfer license file /opt/freesurfer-6.0.0-min/license.txt not found.

  #170 opened 6 years ago by binarybottle
  3

• 'normed' kwarg was deprecated in Matplotlib 2.1

  #176 opened 6 years ago by binarybottle
  1

• Can't simultaneously set both arguments: --roygbiv and --no_points

  #174 opened 6 years ago by binarybottle
  0

• Newest VTK 8.1 version breaks the C++ code

  #171 opened 6 years ago by binarybottle
  1

• Zernike moments ImportError: cannot import name 'factorial'

  #172 opened 6 years ago by binarybottle
  1

• cannot execute binary file: Exec format error

  #162 opened 6 years ago by greedyscript
  2

• mindboggle: command not found

  #160 opened 6 years ago by sunhuaiqiang
  4

• [request] push latest image to dockerhub

  #155 opened 6 years ago by mgxd
  5

• Add ANTs LabelGeometryMeasures for volume stats per label

  #151 opened 6 years ago by binarybottle
  24

• summary statistics of shape measures normalized by area?

  #152 opened 7 years ago by iamjoostjanssen
  2

• thickinthehead fails on large images ***plus discussion about ANTs thickness measures***

  #150 opened 7 years ago by binarybottle
  18

• thickinthehead results incorrect for voxel dimensions other than 1mm^3

  #149 opened 7 years ago by binarybottle
  1