njmei

@AllenInstituteSeattle, WA

Pinned Repositories

AllenSDK
code for reading and processing Allen Institute for Brain Science data
Language:Jupyter Notebook344 34 1.7k150
ipfx
computes intrinsic cell features from intracellular electrophysiology data
Language:Python27 19 27837
open_dataset_tools
Tools for accessing open data sets published by the Allen Institute for Brain Sciences
Language:Jupyter Notebook10 9 33
ophys_etl_pipelines
Pipelines and modules for processing optical physiology data
Language:Python9 7 3255
visual_behavior_analysis
Python package for analyzing behavioral data for Brain Observatory: Visual Behavior
Language:Jupyter Notebook22 10 3766
open-data-registry
A registry of publicly available datasets on AWS
Language:Python1.4k 70 100910
SnapATAC2
Single-cell epigenomics analysis tools
Language:Python226 9 28826
starfish
starfish: unified pipelines for image-based transcriptomics
Language:Python0 0 00
rq-dashboard
Flask-based web front-end for monitoring RQ queues
Language:Python1.4k 44 209328
starfish
starfish: unified pipelines for image-based transcriptomics
Language:Python226 18 69168

njmei/starfish
starfish: unified pipelines for image-based transcriptomics
Language:Python0 0 00