peihengzhang

peihengzhang's Stars

• snowformatics/siFi21-

  Language:Python96

• MunskyGroup/FISH_Processing

  Repository to automatically process ​Fluorescence In Situ Hybridization (FISH) images using Cellpose and BIG-FISH (FISH-quant v2).

  Language:Jupyter Notebook133

• acayuelalopez/CellTypeAnalyzer

  :microscope: This is an ImageJ or Fiji plugin to identify, characterize, quantify and classify cells according to user-defined conditions.

  Language:Java10

• Teichlab/celltypist

  A tool for semi-automatic cell type classification

  Language:Python28044

• imjoy-team/ImJoy

  ImJoy: Deep Learning Made Easy!

  Language:JavaScript18236

• MouseLand/cellpose

  a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

  Language:Jupyter Notebook1.3k379

• CellProfiler/CellProfiler

  An open-source application for biological image analysis

  Language:Python894377

• deweylab/CellO

  CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

  Language:Jupyter Notebook6112

• LieberInstitute/TREG

  Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data

  Language:R42

• BBQuercus/eFISHent

  RNA smFISH oligos/probes design tool

  Language:Python11

• cisen/32bit_RISC-V

  RV32I指令集的32bit RISC-V处理器

  33

• Linnas/RNAi-designer

  GUI toolkit for siRNA design.

  Language:Python65

• sambitmishra0628/siRNA_activity_prediction

  Predicting siRNA activity with machine learning

  Language:Jupyter Notebook238

• MikeAxtell/CleaveLand4

  CleaveLand4: Analysis of degradome data to find sliced miRNA and siRNA targets

  Language:Perl1913

• LinearFold/LinearTurboFold

  An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs

  Language:C++115

• LinearFold/LinearFold

  The new source code of the LinearFold, linear-time prediction for RNA secondary structures

  Language:C++14949

• fish-quant/fish-quant.github.io

  Landing page for fish-quant organization.

  Language:JavaScript11

• PaddlePaddle/PaddleHelix

  Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

  Language:Python976219

• hpcn-uam/Limago

  Limago: an FPGA-based Open-source 100 GbE TCP/IP Stack

  Language:Tcl12246

• fpgasystems/fpga-network-stack

  Scalable Network Stack for FPGAs (TCP/IP, RoCEv2)

  Language:C++731261

• hpcn-uam/100G-fpga-network-stack-core

  This repo contains the Limago code

  Language:C++7825