qi6

qi6's Stars

• pallets/flask

  The Python micro framework for building web applications.

  Language:Python68.5k2.1k2.7k16.2k

• electerious/Lychee

  A great looking and easy-to-use photo-management-system you can run on your server, to manage and share photos.

  Language:PHP6.3k2240672

• CamDavidsonPilon/lifelines

  Survival analysis in Python

  Language:Python2.4k70971562

• alexdobin/STAR

  RNA-seq aligner

  Language:C1.9k792.1k513

• hbctraining/In-depth-NGS-Data-Analysis-Course

  Language:HTML442455268

• hall-lab/speedseq

  A flexible framework for rapid genome analysis and interpretation

  Language:C31546145117

• pcingola/SnpEff

  Language:Java2592651280

• EGroupware/egroupware

  Web based groupware server written in PHP, forum at https://help.egroupware.org/

  Language:PHP25237099

• WGLab/doc-ANNOVAR

  Documentation for the ANNOVAR software

  23525252369

• Nesvilab/FragPipe

  A cross-platform proteomics data analysis suite

  Language:Java213231.8k39

• percolator/percolator

  Semi-supervised learning for peptide identification from shotgun proteomics datasets

  Language:C++1302430637

• Nesvilab/philosopher

  PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering

  Language:Go1141633119

• nh2tran/DeepNovo

  Protein Identification with Deep Learning

  Language:Python94111242

• openvax/mhctools

  Python interface to running command-line and web-based MHC binding predictors

  Language:Python93148322

• cheinle/MetaLIMS

  MetaLIMS, A Simple Open-Source Laboratory Information Management System for Small Metagenomic Labs

  Language:PHP509529

• ngs-course/ngs-course.github.io

  NGS course

  Language:HTML3211015

• nh2tran/DeepNovo-DIA

  De novo peptide sequencing for DDA and DIA by deep learning

  Language:Python324312

• vanallenlab/retained-intron-neoantigen-pipeline

  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.

  Language:Python283911

• openvax/isovar

  Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence

  Language:Python25147713

• bioinformatics-core-shared-training/RNAseq_September_2019

  RNAseq Data Analysis Course, Cambridge University Bioinformatics Training Facility, September 2019

  Language:HTML158013

• hci-gnomex/gnomex

  A genomic LIMS and data repository.

  Language:Java121306

• dnusinow/cRomppass

  Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence

  Language:R9415

• Prathyusha-konda/SpectMHC-v2

  Code used for creating MHC peptide databases.

  Language:Python4201