Issues
- 5
Error:infer_grn(),
#42 opened by wxpbioinfo - 1
- 1
Extract significant modules
#65 opened by AmelZulji - 0
model overfitting
#64 opened by tkisss - 4
regions parameter in initate_grn()
#62 opened by sylestiel - 0
Pando output - enhancer regions
#63 opened by valentinaOpazo - 7
input data normalisation
#48 opened by bjstewart1 - 1
- 4
Advice about a dataset with conditions
#52 opened by AmelZulji - 5
- 5
Error in infer_grn()
#29 opened by TerezaClarence - 1
- 1
Question on grn output: how to interpret the grn output where there are list of TFs and their target genes?
#59 opened by yojetsharma - 1
Error in as_igraph_vs(graph, from) : Invalid vertex names while running plot_tf_network
#58 opened by yojetsharma - 3
Questions on integration and interpretation
#55 opened by JABioinf - 1
plot_network_graph() only plot target genes
#56 opened by zhenzuo2 - 2
Question: celltype-specific GRN
#49 opened by tkisss - 5
Error with "method for 'DefaultAssay<-' applied to an object of class "GRNData"
#57 opened by yojetsharma - 4
issue in initiate_grn- invalid class "Seurat" object: 'assays' must be a named list
#54 opened by heteyszabolcs - 3
initiate_grn error
#40 opened by zhijunyuu - 24
Pando Not Returning Expected GRNs and Limiting Target Genes to a Handful - Possibility of Problem with Mouse Genome?
#30 opened by Sandman-1 - 0
- 0
infer_grn errors
#50 opened by bjstewart1 - 1
Run pando on dataset with different conditions
#43 opened by JoreVW - 1
Where is the Sample Data from Vignettes?
#47 opened by TeodoraTockovska - 2
`coef()` results was changed
#46 opened by mkojima123 - 2
error in initiate_grn()
#44 opened by GouQiao - 1
running time of Pando
#39 opened by crystal0721 - 2
- 21
Infer_grn Function Returning Error
#26 opened by Sandman-1 - 2
ERROR in GRN inference
#36 opened by Usamahussein551980 - 0
where to download the tutorial data
#45 opened by GouQiao - 1
scRNA data only
#38 opened by dimurali93 - 2
Question on custom motif sets
#21 opened by DanielYuhangLi - 1
- 1
- 1
- 0
normalization
#22 opened by xujiahao778899 - 3
I need your help
#34 opened by Usamahussein551980 - 1
- 3
phastCons for Mus musculus
#27 opened by sylestiel - 2
- 1
Error with plot_tf_network
#23 opened by Ping-lin14 - 6
- 13
- 3
"not-yet-implemented 'Matrix[<-' method"
#17 opened by DanielYuhangLi - 1
The model for repressor
#20 opened by yamajackr - 4
- 1
plot_module_metrics(muo_data)
#12 opened by zhenzuo2 - 1
Test data/ vignette data accessibility
#15 opened by dimurali93