quito418

quito418's Stars

• gpt-engineer-org/gpt-engineer

  Platform to experiment with the AI Software Engineer. Terminal based. NOTE: Very different from https://gptengineer.app

  Language:Python52.3k5114826.8k

• openai/chatgpt-retrieval-plugin

  The ChatGPT Retrieval Plugin lets you easily find personal or work documents by asking questions in natural language.

  Language:Python21.1k3232313.7k

• karpathy/minGPT

  A minimal PyTorch re-implementation of the OpenAI GPT (Generative Pretrained Transformer) training

  Language:Python20.1k257722.5k

• danny-avila/LibreChat

  Enhanced ChatGPT Clone: Features Anthropic, AWS, OpenAI, Assistants API, Azure, Groq, o1, GPT-4o, Mistral, OpenRouter, Vertex AI, Gemini, Artifacts, AI model switching, message search, langchain, DALL-E-3, ChatGPT Plugins, OpenAI Functions, Secure Multi-User System, Presets, completely open-source for self-hosting. Actively in public development.

  Language:TypeScript18.5k1191.6k3.1k

• facebookresearch/segment-anything-2

  The repository provides code for running inference with the Meta Segment Anything Model 2 (SAM 2), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.

  Language:Jupyter Notebook11.1k64259944

• alshedivat/al-folio

  A beautiful, simple, clean, and responsive Jekyll theme for academics

  Language:HTML11.1k2356911.2k

• brevdev/notebooks

  Collection of notebook guides created by the Brev.dev team!

  Language:Jupyter Notebook1.7k2517284

• langchain-ai/auto-evaluator

  Language:TypeScript741116399

• HazyResearch/hyena-dna

  Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

  Language:Assembly589216582

• CogStack/OpenGPT

  A framework for creating grounded instruction based datasets and training conversational domain expert Large Language Models (LLMs).

  Language:Jupyter Notebook3369639

• MariaNattestad/Ribbon

  A genome browser designed for complex structural variants and long reads.

  Language:JavaScript264156629

• google/deepsomatic

  DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.

  141112615

• panushri25/emrQA

  Code for the emrQA question answering dataset

  Language:Python1416036

• SamsungSAILMontreal/ForestDiffusion

  Generating and Imputing Tabular Data via Diffusion and Flow XGBoost Models

  Language:Python13581413

• parklab/bamsnap

  Language:HTML11192925

• HKU-BAL/ClairS

  ClairS - a deep-learning method for long-read somatic small variant calling

  Language:Python726317

• HKU-BAL/ClairS-TO

  ClairS-TO - a deep-learning method for tumor-only somatic variant calling

  Language:Python493173

• FoxoTech/methylprep

  Python-based preprocessing software for Illumina methylation arrays

  Language:Python3343414

• itmoon7/onconpc

  Clinical sequencing-based primary site classifier

  Language:Jupyter Notebook32159

• minhhpham/bwa

  Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

  Language:C15103

• gevaertlab/BetaVAEImputation

  Language:Python12713

• Ultimagen/healthomics-workflows

  UltimaGenomics repository for workflows compatible with AWS HealthOmics

  Language:WDL11423

• kaist-ina/RUN-DVC

  Generalizing deep learning-based variant callers via domain adaptation and semi-supervised learning

  Language:Python8300

• Ultimagen/VariantCalling

  Ultima scripts related to downstream processing of WGS, MRD, methylation analysis

  Language:Jupyter Notebook8140

• GuillaumeHolley/TFrecordShuffler

  Language:Python6110

• brucemoran/TumorType-WGS

  Classifying tumor types based on Whole Genome Sequencing (WGS) data

  Language:Python4100

• PaulBratslavsky/next13-chat-blog-repo

  Language:TypeScript4103

• dslarm/bwa-mem2

  The next version of bwa-mem

  Language:C++2000

• acsl-technion/ranger

  Language:C++120

• YStrauch/CI-SpliceAI__Train

  Training code for CI-SpliceAI

  Language:Python1110