rdalbanus
Postdoc @ Dept. of Psychiatry - WashU School of Medicine
https://sites.wustl.edu/hararilab/St. Louis
Pinned Repositories
atactk
A toolkit for working with ATAC-seq data.
BMO
BMO - a tool for predicting TF binding from ATAC-seq data
chromatin_information
A companion repository to our chromatin information manuscript
ATAC-seq
ATACseq-bamToFastq
Snakemake pipeline to correctly convert bam files to fastq without data loss or positional bias
bed_utils
Useful bed file utilities
bioinf545_w20_snATAC
snATAC lab session for BIOINF545 Winter 2020
Bioinformatics-review
Short blurb on tools relevant to my research
conda_envs
Misc conda env config files
utils
rdalbanus's Repositories
rdalbanus/utils
rdalbanus/ATAC-seq
rdalbanus/ATACseq-bamToFastq
Snakemake pipeline to correctly convert bam files to fastq without data loss or positional bias
rdalbanus/bed_utils
Useful bed file utilities
rdalbanus/bioinf545_w20_snATAC
snATAC lab session for BIOINF545 Winter 2020
rdalbanus/Bioinformatics-review
Short blurb on tools relevant to my research
rdalbanus/conda_envs
Misc conda env config files
rdalbanus/containers
Containers for misc analyses
rdalbanus/CytoTalk
A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better characterization of cell-cell communication.
rdalbanus/rclone
"rsync for cloud storage" - Google Drive, S3, Dropbox, Backblaze B2, One Drive, Swift, Hubic, Wasabi, Google Cloud Storage, Yandex Files
rdalbanus/Recipes-for-disaster
rdalbanus/shipt-beeper
A python script to check for open Shipt delivery spots
rdalbanus/snakemake_pipelines
Snakemake pipelines for various tools
rdalbanus/Teaching
My teaching material from courses/workshops
rdalbanus/templates
Templates for common file types