reworkhow/JWAS.jl

Issues

• Genotype file problem

  #154 opened 5 months ago by feasiblee
  3

• runMCMC problem

  #155 opened 6 months ago by feasiblee
  0

• TagBot trigger issue

  #75 opened 4 years ago by JuliaTagBot
  27

• mkmat_incidence_factor

  #139 opened 2 years ago by zhaotianjing
  0

• mkmat_incidence_factor

  #138 opened 2 years ago by zhaotianjing
  0

• Up-to-date samplers?

  #132 opened 2 years ago by braza2
  0

• add native functions to make relationship matrices/kernels

  #85 opened 2 years ago by reworkhow
  0

• Error running JWAS.jl on workflow example data in Julia 1.4.1

  #129 opened 2 years ago by lcwheeler
  1

• Will jwas support longitudinal trait GWAS in the future？

  #123 opened 3 years ago by xiahui625649
  0

• interaction between random factors

  #103 opened 3 years ago by reworkhow
  0

• Easy convergence teat

  #86 opened 4 years ago by reworkhow
  0

• optimization in memory usage

  #84 opened 4 years ago by reworkhow
  0

• memory use in readgenotypes

  #48 opened 4 years ago by reworkhow
  0

• Pi for multi-trait analyisis under Bayes B method

  #76 opened 4 years ago by bosamu05
  0

• add error massages for missing values for fixed effects in phenotype data

  #30 opened 4 years ago by reworkhow
  0

• starting values for convergence diagnosis

  #35 opened 4 years ago by reworkhow
  0

• prior information in model

  #15 opened 4 years ago by reworkhow
  0

• subtype

  #20 opened 4 years ago by reworkhow
  0

• Centering

  #19 opened 4 years ago by reworkhow
  0

• cross validation

  #14 opened 4 years ago by reworkhow
  0

• fix errors with lastest DataFrame and CSV packages

  #74 opened 4 years ago by reworkhow
  0

• Parallel computing on a remote server

  #79 opened 4 years ago by skayondo
  1

• problems with get_genotypes

  #82 opened 4 years ago by MPILESROVIRA
  1

• add output_directory as one argument

  #68 opened 4 years ago by reworkhow
  1

• MCMC_samples_marker_effects_variances_geno.txt is empty

  #72 opened 4 years ago by datasciencetoolkit
  1

• genotype score

  #71 opened 4 years ago by reworkhow
  1

• zero diagonals in MME

  #70 opened 4 years ago by reworkhow
  1

• ERROR: MethodError: no method matching zero(::Type{Any}) when fitting multivariate Bayesian genomic regression

  #64 opened 5 years ago by markcharder
  8

• thinning

  #53 opened 5 years ago by reworkhow
  0

• show Julia Version

  #52 opened 5 years ago by reworkhow
  0

• missing values in fixed effects

  #51 opened 5 years ago by reworkhow
  0

• starting values in threshold model

  #47 opened 6 years ago by reworkhow
  0

• info in model::mme

  #16 opened 6 years ago by reworkhow
  0

• how to use SSBR? I have a question.

  #22 opened 6 years ago by penyao123
  4

• Error running SSBR

  #21 opened 7 years ago by balathumma10
  10

• save all MCMC samples to files

  #12 opened 7 years ago by reworkhow
  0

• extra output variable for variance components

  #18 opened 7 years ago by reworkhow
  0

• getinfo function

  #17 opened 7 years ago by reworkhow
  0

• re-update variance priors

  #4 opened 7 years ago by reworkhow
  0

• window GWAS

  #13 opened 7 years ago by reworkhow
  0

• error introduced by julia0.5

  #6 opened 7 years ago by reworkhow
  3

• construct Lhs and Rhs in MME for multi-trait non-marker part

  #9 opened 7 years ago by reworkhow
  2

• function to set df

  #3 opened 7 years ago by reworkhow
  0

• Rounding error in "P+S" for InverseWishart()

  #7 opened 8 years ago by cbkmephisto
  2

• warning to transpose array of substrings

  #8 opened 8 years ago by reworkhow
  1

• genotype file , phenotype file checking

  #5 opened 8 years ago by reworkhow
  5