rochefort-lab/fissa

Issues

• All other signals present in the cell ROI are 0

  #142 opened 4 years ago by scbsli
  13

• IndexError: list index out of range

  #289 opened a year ago by aurallaura
  2

• `IndexError: list index out of range` while doing experiment.separate()

  #276 opened 3 years ago by GergelyTuri
  3

• ROIs segmented using ImageJ cannot be converted

  #288 opened a year ago by just-meng
  16

• Raw signals do not match suite2p raw signals for the same rois

  #286 opened 2 years ago by just-meng
  1

• Matlab output & nRegions

  #265 opened 3 years ago by MikiBii
  1

• Update Suite2P implementation

  #150 opened 3 years ago by swkeemink
  16

• Problems with numpy.load and allow_pickle

  #85 opened 5 years ago by swkeemink
  9

• ValueError: Wrong ROIs input format: unfamiliar shape.

  #148 opened 3 years ago by foustoukosg
  8

• Change the number of iterations and trials

  #149 opened 3 years ago by foustoukosg
  4

• Too much printed feedback

  #155 opened 3 years ago by swkeemink
  6

• Update test suite

  #10 opened 3 years ago by swkeemink
  1

• Make a datahandler class

  #16 opened 3 years ago by swkeemink
  2

• Installation via pip into conda environment on Windows

  #151 opened 4 years ago by PTRRupprecht
  7

• Stuck on 'Doing signal separation...'

  #147 opened 4 years ago by pocky12
  15

• Bugs in exp.separate

  #146 opened 4 years ago by Hanbing1999
  3

• Loading Oval ROIs on Python 3

  #134 opened 4 years ago by Yoshitaka-Shinagawa
  8

• Source separation

  #23 opened 4 years ago by ehennestad
  2

• Fissa starts region growing and data extraction without experiment.separate()

  #81 opened 5 years ago by Yoshitaka-Shinagawa
  3

• Add support for reading images from HDF5 files

  #22 opened 7 years ago by swkeemink
  0

• Runtime error on windows 64

  #24 opened 5 years ago by GrimmSnark
  9

• Adding a Suite2P example

  #83 opened 5 years ago by swkeemink
  1

• Turn iPython notebooks into Binders

  #3 opened 5 years ago by scottclowe
  5

• Save df_result and df_raw to matfile

  #51 opened 5 years ago by scottclowe
  0

• Adding more options for data storage

  #82 opened 5 years ago by swkeemink
  4

• code for generating simulated data

  #66 opened 5 years ago by zcq0730
  6

• Define ROI subsets to analyze differently

  #19 opened 7 years ago by swkeemink
  0

• Update installation guide to explain dev install

  #17 opened 7 years ago by swkeemink
  0

• Add a MATLAB to Python tutorial

  #69 opened 5 years ago by swkeemink
  0

• Composite ROI type

  #68 opened 5 years ago by swkeemink
  4

• Add a PyPi tutorial

  #39 opened 5 years ago by swkeemink
  5

• Make code Python 3 compliant

  #2 opened 6 years ago by scottclowe
  1

• Invalid cutoff frequency in calc_deltaf

  #25 opened 6 years ago by swkeemink
  2

• Importing from oval ImageJ ROIs

  #5 opened 8 years ago by scottclowe
  2

• Importing ROIs from SIMA datasets

  #6 opened 8 years ago by scottclowe
  2