romainviard

romainviard's Stars

• fchollet/deep-learning-with-python-notebooks

  Jupyter notebooks for the code samples of the book "Deep Learning with Python"

  Language:Jupyter Notebook18.9k6531888.7k

• floydhub/dl-docker

  An all-in-one Docker image for deep learning. Contains all the popular DL frameworks (TensorFlow, Theano, Torch, Caffe, etc.)

  Language:Python3.9k15287817

• nipy/nibabel

  Python package to access a cacophony of neuro-imaging file formats

  Language:Python66537524259

• GameTec-live/ChameleonUltraGUI

  A GUI for the Chameleon Ultra written in Flutter for crossplatform

  Language:Dart4651715437

• ReproNim/neurodocker

  Generate custom Docker and Singularity images, and minimize existing containers

  Language:Python3321829597

• nipreps/mriqc

  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

  Language:Python30218687132

• jorisvandenbossche/pandas-tutorial

  Material for the pandas tutorial at EuroScipy 2016

  Language:Jupyter Notebook207120299

• dPys/PyNets

  A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning

  Language:Python12394441

• edickie/ciftify

  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets

  Language:Python11610118157

• canlab/Neuroimaging_Pattern_Masks

  Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

  Language:HTML10942345

• MICA-MNI/micapipe

  micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

  Language:Shell93411231

• yeatmanlab/AFQ

  Automated Fiber Quantification

  Language:MATLAB76192852

• raamana/visualqc

  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

  Language:Python7376413

• SlicerDMRI/whitematteranalysis

  White matter tractography clustering and more...

  Language:Python7177934

• markus-nilsson/md-dmri

  MATLAB code for Multidimensional Diffusion MRI

  Language:MATLAB45121734

• brain-life/encode

  Method for encoding brain connectomes in multidimensional arrays (tensors).

  Language:MATLAB38132025

• ecr05/MSM_HOCR

  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries

  Language:C++3662310

• yeatmanlab/AFQ-Browser

  Browser-based visualization tools for AFQ results

  Language:JavaScript33814015

• jokedurnez/HCP_download

  Script to download data from the Human Connectome Project, HCP-1200 subjects release.

  Language:Python292013

• tractor/tractor

  Magnetic resonance imaging and tractography with R

  Language:C++28668

• demianw/tract_querier

  Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis

  Language:Python2733526

• SlicerDMRI/ORG-Atlases

  ORG Fiber Clustering White Matter Atlas

  26546

• scilus/ismrm_2015_tractography_challenge_scoring

  Scripts used to recreate the results of the ISMRM 2015 Tractography Challenge

  Language:Python16529

• lodurality/35_methods_MICCAI_2017

  Code for MICCAI 2017 paper

  Language:Python9503

• methodes-cogneuro/methodes-cogneuro.github.io

  Notes de cours pour PSY3018 - Méthodes en neurosciences cognitives

  Language:Jupyter Notebook927911

• UNFmontreal/toad

  No Longer Maintained

  Language:Python787311

• agramfort/scientific-python-intro-45mins

  An intro presentation of scientific Python in 45 minutes

  Language:JavaScript6608

• kerepesi/Brain-Graph-Tools

  Tools for data mining of brain graphs. Related publication: http://dx.doi.org/10.1007/s11571-017-9445-1

  Language:Perl4101

• chrisgorgo/docker-for-scientists

  Language:JavaScript110

• ntala/pyclers

  une version python de l'application plickers

  Language:Python1300