romainviard
a bit of mathematic, lots of computer-science, even more trial-error, I steer my boat in research and medical imaging...
Lille University Hospital, http://www.ci2c.frLille North of France
romainviard's Stars
GameTec-live/ChameleonUltraGUI
A GUI for the Chameleon Ultra written in Flutter for crossplatform
methodes-cogneuro/methodes-cogneuro.github.io
Notes de cours pour PSY3018 - MĂ©thodes en neurosciences cognitives
MICA-MNI/micapipe
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
canlab/Neuroimaging_Pattern_Masks
Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.
SlicerDMRI/ORG-Atlases
ORG Fiber Clustering White Matter Atlas
edickie/ciftify
The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
ecr05/MSM_HOCR
Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
markus-nilsson/md-dmri
MATLAB code for Multidimensional Diffusion MRI
SlicerDMRI/whitematteranalysis
White matter tractography clustering and more...
ReproNim/neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
yeatmanlab/AFQ-Browser
Browser-based visualization tools for AFQ results
raamana/visualqc
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
UNFmontreal/toad
No Longer Maintained
dPys/PyNets
A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
lodurality/35_methods_MICCAI_2017
Code for MICCAI 2017 paper
tractor/tractor
Magnetic resonance imaging and tractography with R
ntala/pyclers
une version python de l'application plickers
yeatmanlab/AFQ
Automated Fiber Quantification
kerepesi/Brain-Graph-Tools
Tools for data mining of brain graphs. Related publication: http://dx.doi.org/10.1007/s11571-017-9445-1
brain-life/encode
Method for encoding brain connectomes in multidimensional arrays (tensors).
jokedurnez/HCP_download
Script to download data from the Human Connectome Project, HCP-1200 subjects release.
fchollet/deep-learning-with-python-notebooks
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
scilus/ismrm_2015_tractography_challenge_scoring
Scripts used to recreate the results of the ISMRM 2015 Tractography Challenge
agramfort/scientific-python-intro-45mins
An intro presentation of scientific Python in 45 minutes
nipreps/mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
chrisgorgo/docker-for-scientists
jorisvandenbossche/pandas-tutorial
Material for the pandas tutorial at EuroScipy 2016
floydhub/dl-docker
An all-in-one Docker image for deep learning. Contains all the popular DL frameworks (TensorFlow, Theano, Torch, Caffe, etc.)
demianw/tract_querier
Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis
nipy/nibabel
Python package to access a cacophony of neuro-imaging file formats