romanhaa/Cerebro

Issues

• unable to find required package ‘Seurat’ on data load with docker

  #19 opened 5 years ago by moxgreen
  3

• Cholmod error in performGeneSetEnrichmentAnalysis(); large dataset

  #31 opened 3 years ago by mAGLAVE
  4

• Maximum Upload Size Exceeded in Standalone Version

  #20 opened 5 years ago by davisidarta
  3

• Input files size/cell number limit

  #35 opened 3 years ago by JMarzec
  1

• Can't open file using Cerebro Shiny app

  #30 opened 4 years ago by ccruizm
  6

• Error: cannot add bindings to a locked environment

  #29 opened 4 years ago by ccruizm
  7

• Cannot find 'print' in this Seurat object

  #28 opened 4 years ago by rpauly
  1

• Can I run the whole program on command line in R?

  #27 opened 4 years ago by rpauly
  1

• Loading in multiple seurat object

  #25 opened 4 years ago by f0ng1203
  3

• Windows application stuck on white screen.

  #22 opened 4 years ago by rpolicastro
  8

• Input of Monocle trajectory analysis

  #21 opened 4 years ago by phoebee-h
  2

• Ability to create custom cell clusters

  #18 opened 5 years ago by gorgitko
  2

• Gene set expression with module score?

  #15 opened 5 years ago by borshago
  2

• Cerebro under proxy server

  #17 opened 5 years ago by kant
  0

• Error: object 'seurat' not found when running 'exportFromSeurat' function

  #16 opened 5 years ago by Puriney
  1

• White screen not going away

  #14 opened 5 years ago by astrovsky01
  14

• Use qs package for faster RDS file loading.

  #13 opened 5 years ago by romanhaa
  0

• Use shinyEventLogger for logging.

  #12 opened 5 years ago by romanhaa
  0

• High performance scatter plots.

  #11 opened 5 years ago by romanhaa
  0

• Consider using packrat to control R packages.

  #10 opened 5 years ago by romanhaa
  0

• Hide elements that are missing?

  #9 opened 5 years ago by romanhaa
  0

• Improve scalability of dimensional reductions.

  #8 opened 5 years ago by romanhaa
  0

• Gene expression tab: clean up "textAreaInput" automatically.

  #7 opened 5 years ago by romanhaa
  0

• Allow user to assign custom colors to samples and clusters.

  #6 opened 5 years ago by romanhaa
  0

• Show sample/cluster label on top of cells in exported dimensional reduction plots.

  #5 opened 5 years ago by romanhaa
  0

• Use loading animations for plots.

  #4 opened 5 years ago by romanhaa
  0

• New panel with useful links about methods.

  #3 opened 5 years ago by romanhaa
  0

• Docker container to launch application.

  #2 opened 5 years ago by romanhaa
  0

• Manual X and Y axis settings don't work anymore in overview panel.

  #1 opened 5 years ago by romanhaa
  0