saezlab/CollecTRI

Issues

• OmnipathR::collectri(organism=9606L, genesymbols=TRUE, loops=TRUE) ERROR

  #22 opened 2 months ago by LorNic97
  1

• omnipathdb.org is down

  #23 opened 2 months ago by karJac
  0

• Missing TF in mouse TRI network

  #20 opened 2 months ago by thnbio
  1

• decoupleR::get_collectri 403 error

  #19 opened 2 months ago by mfranke-2
  6

• CollecTRI interaction confidence level and reference retrieval

  #18 opened 2 months ago by Sophon-0
  1

• commercial use of collectri

  #17 opened 2 months ago by annarerra
  3

• Loading mouse regulons returns human regulons

  #14 opened 2 months ago by annasen
  11

• decoupleR::get_collectri error

  #21 opened 2 months ago by cf98
  15

• problem with collectri package in R

  #16 opened 7 months ago by annarerra
  2

• How to filter non-academic use license resources

  #15 opened 8 months ago by romunov
  4

• ValueError: Invalid value `loops` for `InteractionsQuery`. Valid options are

  #9 opened 10 months ago by nbutyrate
  9

• What are the differences between raw regulons and processed regulons?

  #13 opened a year ago by feather-W
  2

• decoupleR::get_collectri() returns always human regulons

  #12 opened a year ago by riederd
  3

• Error in collectri example

  #10 opened a year ago by pietrisko
  2

• High activity but no expression of a TF

  #8 opened a year ago by BastiDucreux
  2

• Where can I find the CollecTRI rda file or data file for consumption when not working with R or Python?

  #7 opened a year ago by pcm32
  2

• Question about estimating TF activity

  #6 opened a year ago by joan-yanqiong
  1