sanger-pathogens/Bio-Tradis

Issues

• conda install提示需要perl-moose

  #137 opened 3 months ago by wwhwwxlz
  1

• Problems with bacteria_tradis mapping

  #136 opened 7 months ago by bethanyf3
  1

• Possible bug handling reads with clipping when converting mapped reads to insertion plot

  #135 opened 8 months ago by emgemg
  1

• bacteria_tradis tsv extension bug

  #134 opened 10 months ago by adriangeerre
  0

• `tradis_merge_plots` cannot find `tradisfind`

  #133 opened a year ago by cerebis
  3

• how is the insertion index calculated?

  #132 opened a year ago by mpapange
  6

• EdgeR not working with new R version?

  #131 opened a year ago by iawarner
  0

• Issues on running BioTraDIS on multiple contigs

  #130 opened 2 years ago by Madhuskey1993
  1

• Unable to install biotradis

  #128 opened 3 years ago by voonkit
  0

• Essentiality function not working

  #129 opened 3 years ago by sbastkowski
  1

• tradis_comparison issue

  #125 opened 4 years ago by pmireland
  3

• -mm paramater not working as expected

  #127 opened 3 years ago by martinclott
  1

• Problem with insertion plots (files longer than they should be)

  #123 opened 4 years ago by irilenia
  9

• tradis_essentiality.R output a file containing change points?

  #124 opened 4 years ago by BenjaminJPerry
  0

• Possible issue with calculation of read start and ends in module Cigar.pm

  #120 opened 4 years ago by irilenia
  2

• Using Bio-Tradis to analyze mariner-transposon library

  #86 opened 5 years ago by minisciencegirl
  8

• ftp download link in biotradistutorial.pdf no longer exists

  #119 opened 5 years ago by adamdoescode
  0

• test failures with samtools v1.10

  #116 opened 5 years ago by mr-c
  1

• Essentiality analysis code

  #117 opened 5 years ago by apredeus
  4

• installing biotradis on MacOS

  #110 opened 5 years ago by angelovangel
  4

• How to deal with biological replicates - tradis_essentiality.R

  #100 opened 6 years ago by subwaystation
  4

• Installation on Ubuntu 17.10 fails

  #84 opened 7 years ago by apeltzer
  2

• Port 18 volume discrepancy?

  #83 opened 7 years ago by ucpete
  6

• Duplicate genes

  #81 opened 7 years ago by ppgardne
  4

• Installing Bio-Tradis Fail

  #80 opened 7 years ago by minisciencegirl
  6

• cpan update?

  #75 opened 7 years ago by lbarquist
  1

• tradis_comparison.R error

  #71 opened 8 years ago by DanMediati
  3

• Mapping score always set to 1 if -m option used with plot_tradis

  #66 opened 8 years ago by RoyChaudhuri
  0

• Error in step 3.5 of bacteria_tradis, using samtools 1.3

  #63 opened 8 years ago by juanu
  1

• tradis_essentiality.R

  #28 opened 9 years ago by raeece
  1