sc-zhang
Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural SciencesShenzhen, China
Pinned Repositories
AlleleFinder
AlleleFinder is a tool for identifying allele genes from polyploid genome.
ALLHiC_adjuster
A toolset for adjusting ALLHiC assembly
ALLHiC_components
Some components that speed up and reduce resource cost for original ALLHiC
BarcodePHP
A PHP library for generating EAN 8/13 barcode
bioplotz
A plot package for bioinformatics
bioscripts
several scripts for bioinformatics
CATG
CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for assembly.
MATE
MATE (Meaningful Allelic-haploType dEtector) is a tool for identifying allelic haplotype associate with phenotypes.
popCNV
popCNV is a tool for calculating copy number of genes and get genes selected by humans
T2Tools
T2Tools is a toolset contains several tools for T2T assembly, and it is under development.
sc-zhang's Repositories
sc-zhang/bioplotz
A plot package for bioinformatics
sc-zhang/AlleleFinder
AlleleFinder is a tool for identifying allele genes from polyploid genome.
sc-zhang/bioscripts
several scripts for bioinformatics
sc-zhang/CATG
CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for assembly.
sc-zhang/ALLHiC_components
Some components that speed up and reduce resource cost for original ALLHiC
sc-zhang/T2Tools
T2Tools is a toolset contains several tools for T2T assembly, and it is under development.
sc-zhang/ALLHiC_adjuster
A toolset for adjusting ALLHiC assembly
sc-zhang/BarcodePHP
A PHP library for generating EAN 8/13 barcode
sc-zhang/MATE
MATE (Meaningful Allelic-haploType dEtector) is a tool for identifying allelic haplotype associate with phenotypes.
sc-zhang/popCNV
popCNV is a tool for calculating copy number of genes and get genes selected by humans
sc-zhang/ALLHiC_Evaluate_Data_Generators
Some scripts for generating simulate data for evaluating ALLHiC
sc-zhang/CUFscripts
Some scripts for visualizing Papaya SV
sc-zhang/kPart
kPart is a kmer-based tool for partition contigs into groups with parents, previous name is TrioCC
sc-zhang/wbf2wbfs
A simple tool for converting Wii games from wbf format to wbfs, batch convert support.
sc-zhang/PanMarker
PanMarker is a tool for identifying variants associate with phenotypes from pan-genome.
sc-zhang/PanPara
PanPara is a tool for identifying paralog genes with pan-genome.
sc-zhang/boring_codes
Coding when boring.
sc-zhang/KITE
sc-zhang/MHSPF
MHSPF(MicroHomologous Sequences Pairs Finder) is a simple tool for searching MHS pairs from genome
sc-zhang/NGC_Wii_Game_ID
A simple tool for reading and writing game name and game id for Wii (wbfs/iso) and NGC(gcm/iso)
sc-zhang/sc-zhang
sc-zhang/png2ico
The png2ico is a simple tool for converting png file to ico file or ico file to png file.
sc-zhang/Text2Folder
A simple tools which can create multi folders with a list file
sc-zhang/clusterscripts
Scripts for cluster users