sc-zhang

sc-zhang's Stars

• lh3/minimap2

  A versatile pairwise aligner for genomic and spliced nucleotide sequences

  Language:C1.8k851.1k415

• lh3/bwa

  Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

  Language:C1.5k107308557

• vgteam/vg

  tools for working with genome variation graphs

  Language:C++1.1k472.1k195

• chhylp123/hifiasm

  Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

  Language:C++5512967088

• nservant/HiC-Pro

  HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

  Language:Python38618608182

• tangerzhang/ALLHiC

  ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data

  Language:Perl174717739

• zengxiaofei/HapHiC

  HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data

  Language:Python14249010

• tanghaibao/allhic

  Genome scaffolding based on HiC data in heterozygous and high ploidy genomes

  Language:Jupyter Notebook594012

• wangyibin/CPhasing

  Phasing and scaffolding polyploid genomes based on Pore-C or Hi-C.

  Language:Python15301

• Harinlen/HANA

  High-performance Automated Next-generation AllHiC

  Language:C++8400

• Toney823/YXK_Usefull_Tools

  A simple python package for the beginner of Bioinformatics

  Language:Python70

• Yujiaxin419/SRI-Pipeline

  Language:Python6201

• Yujiaxin419/my_script

  Language:Python2210