labrat

A basic science lab framework aimed at reproducibility and lab management. This package is in the very early stages of development.

Features

Easily use math functions to dilute solutions, calculate molarity, etc.
Backup your documents using the command-line
Manage lab inventory using a GUI
Create and manage new projects using the command-line

Install

Clone this repository.
Change to the downloaded repository's base directory.
pip install .

If you want to develop or contribute to this package, install with pip install -e .

This package is compatible with python 3.4 and up.

Examples

Dilute a stock concentration

from labrat.math import dilute_stock

# Get the final concentration
dilute_stock(100, 2, **{'vF': 4})

Create a new computational biology project

from labrat.project import ProjectManager
projectmanager = ProjectManager('Dr. Jane Doe')
projectmanager.new_project(project_type='computational-biology',
                          project_name='KARG Analysis',
                          project_path=os.getcwd())

ToDo

Add a lab inventory app
Add project report template
Command-line functionality
Integrate exmemo

Author

Shaurita Hutchins · @sdhutchins · 📧

Contributing

If you would like to contribute to this package, install the package in development mode, and check out our contributing guidelines.

License

MIT

sdhutchins/labrat