sg-s/crabsort

Issues

• Dealing with files with sweeps within a run of continuous files

  #275 opened 2 years ago by KyraBrandeis
  4

• Link to video tutorial is inaccessible without an authorized Google account

  #274 opened 2 years ago by cosmojg
  2

• needs to work with the new puppeteer.

  #273 opened 4 years ago by sg-s
  0

• crabsort should use the userpath

  #272 opened 4 years ago by sg-s
  0

• if using the toolbox, updating/installing wipes all old spikes

  #267 opened 4 years ago by sg-s
  1

• error running crabsort

  #271 opened 4 years ago by MaraRue
  10

• crabsort should be able to work with read-only data files

  #269 opened 4 years ago by sg-s
  1

• crabsort.convert2crabFormat should also correct for different sampling rates in different files

  #270 opened 4 years ago by sg-s
  0

• need to use parallel.pool.DataQueue to pass data around

  #266 opened 4 years ago by sg-s
  0

• consolidate should also pull out cached temperature

  #265 opened 5 years ago by sg-s
  0

• crabsort should return info on which channel it pulls spikes from

  #263 opened 5 years ago by sg-s
  0

• crabsort should store network in the spikes folder, not the data folder

  #264 opened 5 years ago by sg-s
  0

• pruneSpikes should remove uncertain spike markers

  #262 opened 5 years ago by sg-s
  0

• pruneSpikes should update NNdata

  #261 opened 5 years ago by sg-s
  1

• look into this

  #260 opened 5 years ago by sg-s
  0

• examples of things crabsort can do that nothing else can

  #259 opened 5 years ago by sg-s
  0

• pic1

  #258 opened 5 years ago by MaraRue
  0

• When adding data to the global training dataset

  #257 opened 5 years ago by sg-s
  0

• mask not sticking/not being saved

  #256 opened 5 years ago by sg-s
  0

• Add the inferior oesophageal nerve (ION) to the Crabsort GUI

  #255 opened 5 years ago by jellyjamjan
  1

• crabsort should allow for consolidation from partially sorted files

  #254 opened 5 years ago by sg-s
  0

• Crabsort should store spikes in a centralized location

  #253 opened 5 years ago by sg-s
  0

• data is not correctly normalized across mulitple channels

  #252 opened 5 years ago by sg-s
  0

• We need to worry about data balancing

  #251 opened 5 years ago by sg-s
  0

• issues with md5hash

  #250 opened 5 years ago by sg-s
  0

• Use the transient attribute when saving objects

  #249 opened 5 years ago by sg-s
  0

• Indicate busy operations by changing cursor

  #243 opened 5 years ago by sg-s
  0

• checkSorted should ignore files where the entire file is ignored

  #247 opened 5 years ago by sg-s
  0

• consolidate should preferentially accept spikes from intracellular recordings

  #248 opened 5 years ago by sg-s
  0

• crabsort should resupport showSpikeInContext

  #236 opened 5 years ago by sg-s
  0

• Ignoring the entire section in a file is not saved correctly

  #246 opened 5 years ago by sg-s
  0

• UI should indicate the channel # together with the built-in name

  #244 opened 5 years ago by sg-s
  0

• A complex bug with y_scales and multi-channel data

  #245 opened 5 years ago by sg-s
  0

• intracellular channels should not iteratively find spikes

  #241 opened 5 years ago by sg-s
  1

• Issue with clusterlib.manual

  #242 opened 5 years ago by alec-hoyland
  3

• after running NNpredict, the manual override panel should appear

  #238 opened 5 years ago by sg-s
  0

• smallest_spike is meaningless for intracellular data

  #240 opened 5 years ago by sg-s
  0

• futz_factor doesn't scale correctly for intracellular recordings

  #239 opened 5 years ago by sg-s
  0

• computePeriods doesn't work on ChunkedData

  #237 opened 5 years ago by sg-s
  0

• fatal error loadfile input #2 expected to be cell array, was char instead

  #235 opened 5 years ago by alec-hoyland
  10

• plugins function doesn't respect plugins in multiple folders

  #233 opened 5 years ago by alec-hoyland
  3

• Each channel should have a hide button so it's easy to hide channels

  #228 opened 5 years ago by sg-s
  0

• overhaul plugin architecture

  #230 opened 5 years ago by sg-s
  5

• write a more rigorous testing framework

  #231 opened 5 years ago by sg-s
  0

• debug breakpoints should not be exposed to the end user

  #227 opened 5 years ago by sg-s
  0

• loading a new file should not unselect the currently chosen channel

  #223 opened 5 years ago by sg-s
  0

• automate should silently skip files that have sorted data

  #225 opened 5 years ago by sg-s
  0

• removeMean is slow (200+ ms) and I don't know how to speed it up

  #226 opened 5 years ago by sg-s
  0

• crabsort should offer a new stopping conditions when more than N spikes are found

  #224 opened 5 years ago by sg-s
  0

• up/down keys should select channel above or below current channel

  #222 opened 5 years ago by sg-s
  0