sgratiy

Pinned Repositories

AllenSDK
code for reading and processing Allen Institute for Brain Science data
Language:Jupyter Notebook344 34 1.7k149
ipfx
computes intrinsic cell features from intracellular electrophysiology data
Language:Python26 19 27736
neuron_morphology
Tools for working with single-neuron morphological reconstructions
Language:Python19 13 968
transcriptomic_clustering
improved clustering pipeline for transcriptomic data
Language:Python3 9 550
MERFISH_analysis
Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.
Language:MATLAB0 0 00
mfishtools
Building Gene Sets and Mapping mFISH Data
Language:R0 0 00
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python0 0 00
starfish
starfish: unified pipelines for image-based transcriptomics
Language:Python0 0 00
starfish
starfish: unified pipelines for image-based transcriptomics
Language:Python225 18 68867

sgratiy's Repositories

sgratiy/MERFISH_analysis
Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.
Language:MATLAB0 0 00
sgratiy/mfishtools
Building Gene Sets and Mapping mFISH Data
Language:R0 0 00
sgratiy/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python0 0 00
sgratiy/starfish
starfish: unified pipelines for image-based transcriptomics
Language:Python0 0 00