shivanshss

shivanshss's Stars

• codecrafters-io/build-your-own-x

  Master programming by recreating your favorite technologies from scratch.

  Language:Markdown307k5.4k68928.7k

• FreeTubeApp/FreeTube

  An Open Source YouTube app for privacy

  Language:JavaScript13.5k1883.3k842

• Leleat/Tiling-Assistant

  An extension which adds a Windows-like snap assist to GNOME. It also expands GNOME's 2 column tiling layout.

  Language:JavaScript1.1k825864

• trinityrnaseq/trinityrnaseq

  Trinity RNA-Seq de novo transcriptome assembly

  Language:Perl834571.4k320

• freebayes/freebayes

  Bayesian haplotype-based genetic polymorphism discovery and genotyping.

  Language:C++78546690264

• COMBINE-lab/salmon

  🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

  Language:C++77638831164

• adamqqqplay/dota2ai

  Ranked Matchmaking AI: An improved Dota2 AI based on Valve's default AI. Has more than 3 million subscribers on Steam.

  Language:Lua319255386

• schneebergerlab/plotsr

  Tool to plot synteny and structural rearrangements between genomes

  Language:Python28258328

• AstusRush/AMaDiA

  Astus' Mathematical Display Application : A GUI for Mathematics (Calculator, LaTeX Converter, Plotter, ... )

  Language:Python26217313

• knausb/vcfR

  Tools to work with variant call format files

  Language:R2461619155

• scholablade/Deadobe

  A free culture list of free software alternatives to Adobe products, MIRROR: https://codeberg.org/Scholablade/Deadobe

  238233

• wyp1125/MCScanX

  MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!

  Language:CAP CDS229157159

• dfguan/purge_dups

  haplotypic duplication identification tool

  Language:C208914720

• tskit-dev/tskit

  Population-scale genomics

  Language:Python155121.2k73

• GNOME/sushi

  Read-only mirror of https://gitlab.gnome.org/GNOME/sushi

  Language:C134708

• GuyTeichman/RNAlysis

  Analyze your RNA sequencing data without writing a single line of code

  Language:Python12942713

• andrewsnowden/dota2py

  Python tools for Dota 2

  Language:Protocol Buffer115201336

• bacpop/PopPUNK

  PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

  Language:Python92622020

• MikeWalrus/docx-you-want

  An unusual PDF-to-DOCX converter.

  Language:Rust64231

• dzerbino/oases

  De novo transcriptome assembler for short reads

  Language:C629219

• combogenomics/medusa

  A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.

  Language:Java4273215

• zy-optimistic/GAEP

  A genome assembly assessment pipeline.

  Language:Perl363136

• bcgsc/RAILS

  🚝RAILS and 👞🔨Cobbler: Assembly Improvement by Long Sequence Scaffolding/Gap-filling

  Language:Perl275235

• GenomicsCoreLeuven/GBSX

  GBSX: a toolkit for experimental design and demultiplexing genotyping by sequencing experiments

  Language:Java181195

• hsigeman/findZX

  Language:R171206

• model-map/wikipedia-to-kindle-azw3-pdf

  A bash script to send wikipedia articles to kindle as azw3. Also downloads a pdf to your local directory.

  Language:Shell9100

• MoisesExpositoAlonso/grenepool

  Code for pool seq analyses of the GrENE-net project (grene-net.org)

  Language:Python2201

• elenamdo/GFF-to-GTF-converter

  Converts a GFF file to GTF for Tribolium Castaneum genome

  Language:Python100

• rameshbalan/Tribolium_GWAS

  GWAS on various populations of Tribolium in India

  Language:F*1000

• shreygandhi1990/immune_priming_microbial_composition

  The repository provides the scripts used in the analysis for the manuscript "Immune priming alters microbiome composition in the red flour beetle Tribolium castaneum"

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