wyp1125/MCScanX

Issues

• Question on missing homologous pairs in the .colinearity file

  #27 opened 4 years ago by Mandyzg
  2

• missing homologs

  #34 opened 4 years ago by Everybody888
  3

• MCScanX truncated results.

  #25 opened 4 years ago by koushik1989
  4

• Issues during installation

  #74 opened 9 months ago by AlbertoBernacchi
  1

• No result after run commands

  #53 opened 3 years ago by pcampiteli
  9

• Format of xyz.homology?

  #59 opened 2 years ago by scottcain
  3

• collinearity file does not have any collinear genes

  #35 opened 4 years ago by farhan-lab
  11

• Blast database

  #76 opened 5 months ago by Artifice120
  0

• Warning during the installation and not gining out the results

  #75 opened 6 months ago by Shiva-brahmam03
  0

• File format gff or bed and what format?

  #40 opened 4 years ago by Dearbhaile
  4

• Interpretation of Tandem files

  #62 opened 2 years ago by fafuyyk
  1

• Blast+ blastn, No data in output file

  #72 opened a year ago by Rktf
  1

• [Question] Is Linux ARM64 a supported architecture?

  #55 opened 9 months ago by julien-faye
  1

• Where is MCScanX.zip ??

  #73 opened 10 months ago by tallnuttrbgv
  2

• Can not find source code to download

  #70 opened a year ago by jiangqiuqiuu
  1

• ask help for draw collinearity only one chromsomoe use mcscanx

  #71 opened a year ago by Jiangjiangzhang6
  0

• Reading gff error: For input string: "2147774468"

  #63 opened 2 years ago by limengchen628
  2

• Is it possible to generate collinearity file from 1 to 1 orthology tables?

  #69 opened a year ago by sheinasim
  0

• Example DATA not working

  #48 opened 3 years ago by Dearbhaile
  2

• Low number of collinear genes

  #68 opened a year ago by DustinSokolowski
  0

• Website not charging to download

  #57 opened 2 years ago by mpalmada
  1

• Versioned release package for MCScanX

  #60 opened 2 years ago by jayramr
  1

• .tandem file was not created!

  #67 opened a year ago by sashulkaSh
  1

• Question

  #65 opened 2 years ago by AndyLy2Zy
  2

• using java

  #66 opened 2 years ago by YingyingZ9
  0

• where can I find gtf_to_mcs.pl script

  #64 opened 2 years ago by LandiMi2
  0

• Circle_plotter prints half circle with higher number of chromosomes

  #54 opened 2 years ago by jgnunes
  1

• Does MCScanX support multi-threading?

  #61 opened 2 years ago by sunjiahe-hub
  0

• detect_collinearity_within_gene_families.pl

  #58 opened 2 years ago by Lighter-k
  0

• Increase the default length of species ID (from gff/bed)

  #41 opened 3 years ago by zhaotao1987
  1

• The problem with drawing with the JAVA MCscanX

  #51 opened 3 years ago by Wenwen012345
  2

• cannot open cds file

  #52 opened 3 years ago by ABDULLAHGUJJAR
  0

• blastall: command not found

  #42 opened 3 years ago by ankush290307
  1

• Docker container and working example data

  #50 opened 3 years ago by chriswyatt1
  0

• request for your help to understand the syntheny plot

  #49 opened 3 years ago by amit4mchiba
  1

• Cluster enabled version of MCScanX

  #32 opened 3 years ago by sanyalab
  1

• Wrong bed like file

  #45 opened 3 years ago by zoomlion
  1

• Epoch

  #47 opened 3 years ago by anandksrao
  0

• issus installing MCScanX

  #46 opened 3 years ago by alonziso
  0

• Restarting with -a option

  #44 opened 3 years ago by conJUSTover
  0

• Question regarding blast

  #43 opened 3 years ago by Karimi-81
  0

• Mscanx Alignment e-value

  #39 opened 4 years ago by yuanning-li
  0

• Newick format

  #38 opened 4 years ago by mictadlo
  0

• limitation of species?

  #37 opened 4 years ago by Zhuxitong
  0

• MCScanX_h

  #36 opened 4 years ago by lisiruiyu
  0

• family_circle_plotter error: cannot find symbol

  #33 opened 4 years ago by ijeremy
  2

• help for old version of MCScanX for parameter U

  #31 opened 4 years ago by altingia
  0

• collinearity.pl

  #26 opened 4 years ago by SAMANDOLL
  0

• Question on Duplicate gene classifier

  #24 opened 4 years ago by sanyalab
  0

• Error in family_tree_plotter

  #23 opened 5 years ago by ashish674675
  1