tallnuttrbgv
For RBGV repos please go to https://github.com/Royal-Botanic-Gardens-Victoria
Royal Botanic Gardens VictoriaMelbourne
Pinned Repositories
hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Augustus
Genome annotation with AUGUSTUS
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
datasets
NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.
EDTA
Extensive de-novo TE Annotator
ables
Australian BioCommons Leadership Share (ABLeS) documentation
DNA_entropy_scripts
Python scripts for calculating and filtering DNA entropy
gadi-hybpiper
Scripts for running Hybpiper2 on NCI Gadi
HybPiper-RBGV
Nextflow/Singularity pipeline for running modified scripts from HybPiper (https://github.com/mossmatters/HybPiper)
species2taxid.py
Gets the NCBI TaxID and full taxonomy from species name.
tallnuttrbgv's Repositories
tallnuttrbgv/ables
Australian BioCommons Leadership Share (ABLeS) documentation
tallnuttrbgv/DNA_entropy_scripts
Python scripts for calculating and filtering DNA entropy
tallnuttrbgv/gadi-hybpiper
Scripts for running Hybpiper2 on NCI Gadi
tallnuttrbgv/HybPiper-RBGV
Nextflow/Singularity pipeline for running modified scripts from HybPiper (https://github.com/mossmatters/HybPiper)
tallnuttrbgv/species2taxid.py
Gets the NCBI TaxID and full taxonomy from species name.