skovaka/UNCALLED

Issues

• Building with HDF5/1.14.4.3

  #60 opened 16 days ago by pgrt
  0

• Fast5 file `vbz` problem

  #59 opened 3 months ago by peiyihe
  2

• Error when trying example

  #58 opened 6 months ago by peiyihe
  12

• Computer requirement for UNCALLED

  #52 opened a year ago by ylang0825
  1

• Sequenced reads are too short

  #55 opened a year ago by ylang0825
  4

• Remove mux scan windows from Flongle run

  #57 opened a year ago by maximilianmordig
  1

• New release

  #56 opened a year ago by JacobJanzen
  2

• Installation on Ubuntu (issue with compiler)

  #54 opened a year ago by jennieli421
  5

• `sim` segmentation error

  #53 opened a year ago by jennieli421
  7

• Visualising f5c resquiggle output in UNCALLED4

  #51 opened 2 years ago by hasindu2008
  6

• [QUESTION] 10X run-time for reads of 500 raw signals

  #50 opened 2 years ago by harisankarsadasivan
  12

• Installing UNCALLED4 error

  #49 opened 2 years ago by hasindu2008
  12

• uncalled failed to connect to minknow instance

  #44 opened 2 years ago by ccr25
  3

• [QUESTION] mapping to reference stringency

  #48 opened 2 years ago by ccr25
  1

• Updated Uncalled and Minknow No Longer Working

  #46 opened 2 years ago by sbabbbie
  4

• Generating sequencing summary from fast5 raw reads

  #47 opened 2 years ago by maximilianmordig
  1

• Running Uncalled using Flongle flow cell

  #45 opened 2 years ago by Nirmal2310
  2

• Floating point exception

  #43 opened 2 years ago by hasindu2008
  8

• MemoryError: std::bad_alloc

  #37 opened 2 years ago by hasindu2008
  5

• Uncalled in ubuntu 16

  #41 opened 3 years ago by joscarhuguet
  3

• Segmentation fault in 'uncalled sim'

  #42 opened 2 years ago by WeipengMO
  3

• Implementation on ARM64 Raspberry Pi 4

  #33 opened 3 years ago by trappaj
  3

• [QUERY] Can I test UNCALLED to always try and map only 2000 raw samples from FAST5

  #40 opened 3 years ago by harisankarsadasivan
  1

• Computer Specifications

  #39 opened 3 years ago by Kav57
  1

• Error when running uncalled map

  #38 opened 3 years ago by ncolaian
  5

• Minimum hardware requirements

  #36 opened 3 years ago by snystrom
  4

• undemultiplex fast5

  #32 opened 3 years ago by aspitaleri
  5

• barcodes

  #34 opened 3 years ago by ramoya
  2

• Read lengths in .paf files

  #35 opened 3 years ago by chAwater
  3

• Question about only the leftmost mapped reads are reported

  #31 opened 3 years ago by twang18
  2

• [Question] RNA sequencing

  #8 opened 4 years ago by martynakgajos
  4

• AttributeError: 'uncalled.minknow_client' has no attribute 'Client'

  #30 opened 3 years ago by MayerMarvin
  2

• CLARIFICATION: What is limiting UNCALLED from being evaluated for r9.4.1?

  #29 opened 3 years ago by harisankarsadasivan
  4

• Building reference gene panel, advise

  #25 opened 4 years ago by ChloeDG
  4

• Installation on Ubuntu 20.04.2

  #28 opened 4 years ago by enio23
  1

• Regarding library prep for UNCALLED sequencing

  #26 opened 4 years ago by idahoijer
  2

• installation problem

  #27 opened 4 years ago by aspitaleri
  1

• Segmentation error in simulation

  #22 opened 4 years ago by frontzekkarl
  3

• Error message when starting UNCALLED

  #23 opened 4 years ago by robingarcia
  7

• Which port number should I use in `uncalled realtime --port`

  #17 opened 4 years ago by devxia
  6

• How to download raw signal data?

  #14 opened 4 years ago by haowenz
  2

• ModuleNotFoundError: file_read_backwards

  #21 opened 4 years ago by marcus1487
  1

• Installation on macOS

  #19 opened 4 years ago by vsbanry
  0

• No acquisition run available: failed pre-condition error

  #15 opened 4 years ago by ChloeDG
  3

• Unmapped reads not ejecting

  #16 opened 4 years ago by jkzrich
  4

• Sorry for ask a stringtie2 question here

  #13 opened 4 years ago by biozhangzhou
  0

• Elimination of false positive seed mappings and detection of indels

  #12 opened 4 years ago by timmocking
  2

• Simulator bug?

  #11 opened 4 years ago by dithiii
  2

• Error running 'uncalled map'

  #10 opened 4 years ago by jkzrich
  2

• Last channel is too large error

  #9 opened 4 years ago by vineeth-s
  2