suhrig

Pinned Repositories

STAR
RNA-seq aligner
Language:C1.8k 84 2k494
bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell1.6k 96 1.8k3.1k
sra-tools
SRA Tools
Language:C1.1k 57 827243
methylseq
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
Language:Nextflow135 146 122130
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
Language:Nextflow257 145 1.6k645
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Language:Nextflow795 153 619669
arriba
Fast and accurate gene fusion detection from RNA-Seq data
Language:C++211 14 23450
HLA-LA
Fast HLA type inference from whole-genome data
Language:C++00
pingpongpro
Find ping-pong signatures in piRNA-Seq data like a pro
Language:C++4 3 52
tabv
a tabular data viewer for the command-line
Language:Shell10

suhrig's Repositories

suhrig/arriba
Fast and accurate gene fusion detection from RNA-Seq data
Language:C++211 14 23450
suhrig/pingpongpro
Find ping-pong signatures in piRNA-Seq data like a pro
Language:C++4 3 52
suhrig/tabv
a tabular data viewer for the command-line
Language:Shell10
suhrig/HLA-LA
Fast HLA type inference from whole-genome data
Language:C++00