tonypanx

tonypanx's Stars

• bowang-lab/scGPT

  Language:Jupyter Notebook1.2k33255241

• kassambara/survminer

  Survival Analysis and Visualization

  Language:R52526571168

• therneau/survival

  Survival package for R

  Language:R40018261106

• BioinformaticsFMRP/TCGAbiolinks

  TCGAbiolinks

  Language:R30923620116

• saezlab/liana

  LIANA: a LIgand-receptor ANalysis frAmework

  Language:R196916932

• igrabski/sc-SHC

  Significance analysis for clustering single-cell RNA-sequencing data

  Language:HTML11362813

• carmonalab/STACAS

  R package for semi-supervised single-cell data integration

  Language:R795329

• nitzanlab/biolord

  Language:Python763105

• Teichlab/Genes2Genes

  Aligning gene expression trajectories of single-cell reference and query systems

  Language:Jupyter Notebook60288

• KlugerLab/GeneTrajectory

  R implementation of GeneTrajectory

  Language:R5671610

• gregbellan/Stabl

  Language:Jupyter Notebook5531517

• suinleelab/contrastiveVI

  Language:Python53781

• xiaoyeye/TFvelo

  Language:Jupyter Notebook441156

• kunwang34/PhyloVelo

  PhyloVelo, Phylogeny-based transcriptomic velocity of single cells

  Language:Python433114

• YosefLab/velovi

  Language:Python394157

• kevinblighe/RegParallel

  Standard regression functions in R enabled for parallel processing over large data-frames.

  Language:R3831412

• yutongo/TIGON

  Language:Jupyter Notebook36156

• WanluLiuLab/scAtlasVAE

  Language:Python30135

• Roy-lab/scMTNI

  Language:C255224

• bioinfo-biols/SEVtras

  sEV-containing droplet identification in scRNA-seq data (SEVtras)

  Language:Python241347

• rongstat/SMAI

  Alignability testing and integration of single-cell data

  Language:R21423

• PoolLab/ReferenceEnhancer

  Language:R20385

• immunogenomics/GeNA

  Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell datasets

  Language:Jupyter Notebook121151

• stephenslab/seurat-wrappers

  Community-provided extensions to Seurat

  Language:R120