annotation-agnostic

There are 11 repositories under annotation-agnostic topic.

lcolladotor/derfinder
Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
Language:R42 24 3215
leekgroup/recount
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
Language:R40 15 239
LieberInstitute/recount3
Explore and download data from the recount3 project
Language:R31 8 544
leekgroup/recount-website
Code for the Recount project
Language:R11 12 255
leekgroup/recount-contributions
Contribute your human Illumina RNA-seq data to recount2
5 13 23
LieberInstitute/recount.bwtool
Fast coverage matrices from recount data using bwtool
Language:R4 6 01
LieberInstitute/recountWorkflow
Public repo for the recount Bioconductor workflow that is visible at http://bioconductor.org/help/workflows/
Language:TeX4 7 0
leekgroup/recount-analyses
Example analyses using recount
Language:HTML2 13 0
aladhims/universalist
A Universal IDE agnostic highlighter list for annotation like TODO, FIXME etc (or your own custom annotations)
Language:Go1 0 01
LieberInstitute/recountWorkshop
Package for the recount workshop for BioC2017
Language:HTML1 6 11
LieberInstitute/recountWorkshop2019
Workshop proposal for BioC2019 centered around the recount2 resource
Language:TeX6 1