variani/lme4qtl

Issues

• GRM matrix constraints

  #37 opened 3 months ago by rbutleriii
  1

• p values for betas

  #26 opened 4 years ago by malawsky
  3

• speed up relmatLmer?

  #36 opened 7 months ago by GuoanQi1996
  1

• how to apply GRM matrix into longitudinal data?

  #27 opened 3 years ago by ConnieXuhm
  5

• Checking for Multi-collinearity

  #35 opened a year ago by dhrititandon
  1

• How to generate matrix like kin2?

  #34 opened 2 years ago by linfneg
  1

• Predicting new data/unobserved phenotypes

  #33 opened 2 years ago by rtassinari
  1

• Error in is.nloptr(ret) : objective in x0 returns NA

  #32 opened 2 years ago by NicMAlexandre
  4

• PIRLS step-halvings failed to reduce deviance in pwrssUpdate with probit relmatGlmer

  #30 opened 3 years ago by zoeluo15
  4

• cannot coerce type 'closure' to vector of type 'character'

  #31 opened 3 years ago by opain
  2

• Use matlm for interaction between dependent variable and SNP

  #29 opened 3 years ago by DesmondSmith
  2

• Negative binomial models

  #28 opened 3 years ago by DesmondSmith
  2

• Perform EVD outside relmatLmer/relmatGlmer

  #6 opened 7 years ago by variani
  5

• available via CRAN?

  #9 opened 6 years ago by nick-youngblut
  12

• Ideas to be update `lme4qtl` due to `rBind()` function

  #25 opened 4 years ago by mvazquezs
  1

• ICC or h2 for binary response.

  #24 opened 4 years ago by lmorozcor
  1

• Multiple matrices as random effects

  #23 opened 4 years ago by msohail88
  2

• Details of the Eigenvalue decomposition operation

  #22 opened 5 years ago by hl-anna
  1

• way to adjust for kinship only?

  #21 opened 5 years ago by complexgenome
  3

• Confidence Intervals Errors

  #7 opened 5 years ago by aneumann-science
  4

• Warning for RE variable mismatch in formula and relmat

  #20 opened 5 years ago by variani
  1

• error with reference class field ‘Ut’, should be from class “dgCMatrix”

  #1 opened 5 years ago by marisalver
  7

• How to do unstructured and how to do compound symmetry heterogeneous covariance models ?

  #17 opened 5 years ago by paris007
  0

• Remove effect of the modeled VCV (e.g., pedigree) from the expected values of y

  #16 opened 5 years ago by johannesbjork
  1

• random slope

  #13 opened 6 years ago by variani
  0

• assocLMer

  #14 opened 6 years ago by tshori
  2

• "direct" test of SNP in relmatGlmer / relmatLmer

  #15 opened 6 years ago by danfulop
  2

• General doubts & ideas to improve 'lme4qtl'

  #12 opened 6 years ago by mvazquezs
  4

• Family data, genetic variant

  #10 opened 6 years ago by Tubahy
  2

• Error about kinship matrix

  #11 opened 6 years ago by JulongWei
  3

• relmatGlmer slow

  #8 opened 7 years ago by FinSalMar
  1

• Code hangs when using relmatGlmer

  #2 opened 7 years ago by emrussell
  2

• help documentation

  #4 opened 7 years ago by calebglossrex
  3

• lme4qtl compared to lmekin?

  #3 opened 7 years ago by m66k
  3

• Repeated measurements using relmatGlmer

  #5 opened 7 years ago by MelLinde
  4