vinisalazar/metaphor

Issues

• DAS tool issue

  #83 opened 3 months ago by francesco-ricci
  3

• mapping issue

  #82 opened 4 months ago by francesco-ricci
  7

• DAS tool issue

  #80 opened 4 months ago by francesco-ricci
  4

• vamb issue

  #75 opened 4 months ago by francesco-ricci
  7

• vamb: error: unrecognized arguments: --jgi output/mapping/cobinning/bam_contigs_depths.txt

  #77 opened 5 months ago by francesco-ricci
  7

• display X server

  #76 opened 5 months ago by eachraf
  1

• ModuleNotFoundError: No module named 'vbgmm'

  #74 opened 5 months ago by francesco-ricci
  8

• Which minimap2 version is running?

  #72 opened 6 months ago by s-junguy
  4

• Clarify No. bp in assembly_report.tsv

  #73 opened 6 months ago by s-junguy
  2

• metaphor test errors

  #70 opened 6 months ago by mariafpv
  9

• Clarification on Prokka annotation within metaphor

  #69 opened 6 months ago by KatharinaHoff
  5

• handling of blank/control samples

  #58 opened 8 months ago by ganiatgithub
  2

• Metaphor execution cancelled

  #59 opened 8 months ago by o-enric
  8

• Error in rule fastqc_raw

  #62 opened 8 months ago by s-junguy
  9

• Metaphor test issue

  #64 opened 8 months ago by francesco-ricci
  2

• Fastqc error

  #65 opened 8 months ago by francesco-ricci
  6

• Error in rule concatenate_contigs

  #68 opened 8 months ago by francesco-ricci
  14

• Waiting at most 5 seconds for missing files

  #63 opened a year ago by viksiem
  3

• package das_tool could not be installed

  #60 opened a year ago by s-junguy
  2

• Error in rule megahit

  #57 opened a year ago by viksiem
  3

• AttributeError: Rectangle.set() within plot_cog_taxonomy

  #55 opened a year ago by ganiatgithub
  5

• configuring threads/cores in local run

  #53 opened a year ago by Perugolate
  1

• iteritems in bins_report.py

  #54 opened a year ago by ganiatgithub
  2

• Error while installing metaphor in a new device

  #52 opened a year ago by BioInfoStar5
  4

• Error while running "metaphor test" command line

  #51 opened a year ago by BioInfoStar5
  11

• maybe related to concatenate.py

  #50 opened a year ago by ganiatgithub
  5

• checkpoint function or restart

  #49 opened a year ago by ganiatgithub
  6

• Weird taxa abundance plots

  #47 opened a year ago by camilogarciabotero
  9

• Latex module fails when making reports

  #45 opened a year ago by camilogarciabotero
  3

• Error in No such file or directory: 'y'

  #44 opened a year ago by ganiatgithub
  2

• Missing output during test run

  #43 opened a year ago by ganiatgithub
  6

• Feature names problem when running concoct

  #37 opened 2 years ago by francesco-ricci
  1

• Restarting pipeline from broken step

  #34 opened 2 years ago by francesco-ricci
  2

• Issue concatenate_benchmarks

  #33 opened 2 years ago by francesco-ricci
  4

• ValueError: Length mismatch: Expected axis has 0 elements, new values have 3 elements

  #30 opened 2 years ago by francesco-ricci
  2

• snakemake problem

  #31 opened 2 years ago by francesco-ricci
  10