welyt

welyt's Stars

• f/awesome-chatgpt-prompts

  This repo includes ChatGPT prompt curation to use ChatGPT better.

  Language:HTML112k1.4k015.2k

• pytorch/pytorch

  Tensors and Dynamic neural networks in Python with strong GPU acceleration

  Language:Python82.9k1.7k45.6k22.4k

• lencx/ChatGPT

  🔮 ChatGPT Desktop Application (Mac, Windows and Linux)

  Language:Rust52.6k4451.1k5.9k

• streamlit/streamlit

  Streamlit — A faster way to build and share data apps.

  Language:Python35.1k3184.6k3k

• cool-RR/PySnooper

  Never use print for debugging again

  Language:Python16.4k228134952

• pyodide/pyodide

  Pyodide is a Python distribution for the browser and Node.js based on WebAssembly

  Language:Python12.1k1281.7k827

• optuna/optuna

  A hyperparameter optimization framework

  Language:Python10.7k1171.7k1k

• Visualize-ML/Book4_Power-of-Matrix

  Book_4_《矩阵力量》 | 鸢尾花书：从加减乘除到机器学习；上架！

  Language:Python8.7k731611.3k

• dreamRs/esquisse

  RStudio add-in to make plots interactively with ggplot2

  Language:R1.8k51230229

• facebookincubator/submitit

  Python 3.8+ toolbox for submitting jobs to Slurm

  Language:Python1.3k24118120

• MultiQC/MultiQC

  Aggregate results from bioinformatics analyses across many samples into a single report.

  Language:JavaScript1.2k351.6k598

• bwa-mem2/bwa-mem2

  The next version of bwa-mem

  Language:C++7193621398

• jnothman/UpSetPlot

  Draw UpSet plots with Matplotlib

  Language:Python324815663

• brentp/bwa-meth

  fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome

  Language:Python141137754

• epigenelabs/pyComBat

  pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, in microarray expression data.

  Language:Python7761722

• tanjimin/C.Origami

  C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.

  Language:Python634269

• shendurelab/cfDNA

  Analysis of epigenetic signals captured by fragmentation patterns of cell-free DNA

  Language:Python5913729

• nloyfer/UXM_deconv

  Language:Python3781711

• TimoLassmann/samstat

  SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.

  Language:C233146

• XWangLabTHU/DISMIR

  Language:Python223210

• sklasfeld/DANPOS3

  Updated DANPOS2 to work with python3

  Language:Python20285

• dohlee/snakemake-wrappers

  :snake: Snakemake wrappers for bioinformatics.

  Language:Python18202

• GavinHaLab/ichorCNA

  Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

  Language:R1221410

• cancer-genomics/gemini_wflow

  Language:R10230

• epigen/LIQUORICE

  A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies

  Language:Python97105

• hellosunking/Msuite2

  Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance

  Language:C++91102

• kaistomics/cfWGS

  Language:Python6210

• butyuhao/mHapTools

  Language:C5322

• sdcurtis/LudwigCenterBaltimore

  Repository for projects from the Ludwig Center for Cancer Genetics and Therapeutics

  Language:Python2

• xiaoqiangq/UMaC

  Language:Java21