xavierdidelot/TransPhylo

Issues

• Printing Edges of the Transmission Tree

  #36 opened 4 months ago by MarriaK
  1

• Question about pi's function

  #35 opened 5 months ago by PaulaSinis
  2

• Approach to select appropriate priors for generation and sampling time distributions

  #30 opened a year ago by dpenas-u
  6

• Multi-tree capability

  #34 opened 7 months ago by MarliesJFrancine
  2

• Save result as phylo object

  #33 opened 8 months ago by MarliesJFrancine
  1

• Errors when using infer_multittree_share_param

  #32 opened a year ago by lingxuan85511
  4

• Temporal singnal detection

  #31 opened a year ago by liuxiong714
  1

• error?

  #29 opened a year ago by liamxg
  6

• Manipulating/edit plots

  #28 opened 2 years ago by am-epi
  2

• Adding priors and/or postprocessing

  #27 opened 2 years ago by sapoudel
  1

• Generation time first to Sampling time?

  #26 opened 2 years ago by dpenas-u
  1

• summary.resTransPhylo

  #25 opened 2 years ago by am-epi
  2

• Question about inferTTree parameters

  #24 opened 2 years ago by am-epi
  11

• Samples dated earlier than actual sampling date in t-tree

  #20 opened 2 years ago by lborcard
  3

• Last date format

  #19 opened 2 years ago by lborcard
  7

• Run time differences depending on tree time scale

  #16 opened 3 years ago by igoldsteinh
  7

• Consensus and medoid trees on mult_ttree

  #15 opened 3 years ago by GaloGS
  2

• Trouble importing ML tree into TransPhylo

  #14 opened 5 years ago
  1

• Please create conda package

  #13 opened 5 years ago by pvanheus
  8

• bactdating followed by transphylo

  #12 opened 5 years ago by fengyuchengdu
  1

• Too many iterations error

  #11 opened 6 years ago by ksw9
  2

• Choosing a plausible Gamma prior

  #8 opened 6 years ago by phiweger
  1

• Error "negative branch lengths" w/o negative branch lengths

  #7 opened 6 years ago by phiweger
  2

• installation problem

  #5 opened 7 years ago by thkuo
  2

• underflow on large trees

  #4 opened 7 years ago by gtonkinhill
  1

• Error message when running inferTTree

  #1 opened 8 years ago by wilssh
  1