Pinned Repositories
anvio.org
The anvi'o community web page
anvio_import_parsers
Assemblytics
Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.
bioconda-recipes
Conda recipes for the bioconda channel.
book
cheatsheets
My cheatsheets
datadrivencv-academic
genome_annotation_with_Maker2
one-liners
Just a collection of usefull one-liners, often a bit too long to remember
stuff
Repository for miscellaneous stuff not worth of independent repos
xvazquezc's Repositories
xvazquezc/datadrivencv-academic
xvazquezc/genome_annotation_with_Maker2
xvazquezc/one-liners
Just a collection of usefull one-liners, often a bit too long to remember
xvazquezc/stuff
Repository for miscellaneous stuff not worth of independent repos
xvazquezc/anvio.org
The anvi'o community web page
xvazquezc/anvio_import_parsers
xvazquezc/Assemblytics
Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.
xvazquezc/bioconda-recipes
Conda recipes for the bioconda channel.
xvazquezc/book
xvazquezc/cheatsheets
My cheatsheets
xvazquezc/ColabFold
Making Protein folding accessible to all via Google Colab!
xvazquezc/conda-recipes
bioinformatics program recipes for the conda package manager
xvazquezc/EMBLmyGFF3
An efficient way to convert gff3 annotation files into EMBL format ready to submit.
xvazquezc/funannotate
Eukaryotic Genome Annotation Pipeline
xvazquezc/gene2product
Curated list of gene names and product descriptions that pass NCBI genome submission rules.
xvazquezc/graftM
GraftM - Rapid community profiles from metagenomes
xvazquezc/HERA-PBSPro
This is a PBSPro (Protable Batch System) based pipeline to perform HERA (Highly Efficient Repeat Assembly) program.
xvazquezc/jekyll-scholar
jekyll extensions for the blogging scholar
xvazquezc/markdown-cv
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
xvazquezc/metabolic-hmms
HMM databases for microbial metabolic genes of environmental/biogeochemical importance.
xvazquezc/multiPhATE2
multiPhATE with comparative genomics
xvazquezc/OTUsamples2krona
Simple script to generate Krona charts for all samples in an OTU table file
xvazquezc/PenrynTutorial
Metagenomics tutorials for Penryn symposium
xvazquezc/singlem
De-novo OTUs from shotgun metagenomes
xvazquezc/xvazquezc.github.io