zktuong
I'm a Group leader at The University of Queensland on Pediatric Systems Immunology and I use R and python to analyse lots of single-cell RNAseq data
The University of Queensland
Pinned Repositories
dandelion
dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data
databases_for_vdj
databases for V(D)J-seq
getSRA
wrapper bash scripts to download fastq files from SRR
kelvinny
Kelvin's R package that holds wrapper functions for a number of work things
ktplots
Some tools for plotting single-cell data
ktplotspy
Python library for plotting Cellphonedb results. Ported from ktplots R package.
scFunctions
Functions for single cell data analysis
zktuong's Repositories
zktuong/bam2fastq
Simple convertor from bam to FASTQ
zktuong/hola
Human-like Orthogonal Layout Algorithm
zktuong/patchwork
The Composer of ggplots
zktuong/QUASR