zocean
Computational Biology Department at Carnegie Mellon University
Carnegie Mellon UniversityPA, USA
Pinned Repositories
academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
ChromatinImaging
Super-resolution chromatin tracing 2018
Marta_TFBS_tracing
This repo hosts the scripts used for tracing the evolution history of ruminants TFBS evolution using the birth-death probabilistic model developed by Yokoyama and Zhang et al. 2014 PLoS CB
NB_IDR_demo
Norma
tbsp
Trajectory Inference Based on SNP information.
TSA-seq_toolkit
zocean's Repositories
zocean/Marta_TFBS_tracing
This repo hosts the scripts used for tracing the evolution history of ruminants TFBS evolution using the birth-death probabilistic model developed by Yokoyama and Zhang et al. 2014 PLoS CB
zocean/Norma
zocean/ChromatinImaging
Super-resolution chromatin tracing 2018
zocean/NB_IDR_demo
zocean/tbsp
Trajectory Inference Based on SNP information.
zocean/TSA-seq_toolkit
zocean/academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
zocean/awesome-deepbio
A curated list of awesome deep learning applications in the field of computational biology
zocean/cheatsheets
My cheatsheets
zocean/cross-filter_scatterplot
zocean/crossfilter_scatterplot
zocean/cs-video-courses
List of Computer Science courses with video lectures.
zocean/Cytoruler
zocean/fastqe
FASTQ sequence quality visualisation with Emoji
zocean/google-interview-university
A complete daily plan for studying to become a Google software engineer.
zocean/higashi-Pipeline
A Python package that process Higashi output to CellScope
zocean/napari-nucleome
zocean/napari-nucleome-tutorial
Documentation and tutorial for using naprai-nucleome plugin to visualize multiplex imaging together with genomic data
zocean/NB_crossview
zocean/NB_HiGlass
zocean/NB_tutorial
zocean/Norma_app
zocean/oneliners
Useful bash one-liners for bioinformatics.
zocean/Phylo_MRF
code to analyze the prediction of Phylo_MRF
zocean/rna-seq-pipeline
zocean/sessions
Publish Sessions
zocean/SPIN_rebuild
zocean/SuPreMo
Pipeline for generating reference and perturbed sequences for input into predictive models.