Aggarwal-Ayush

Aggarwal-Ayush's Stars

• soulmachine/machine-learning-cheat-sheet

  Classical equations and diagrams in machine learning

  Language:TeX7.5k386151.3k

• github/personal-website

  Code that'll help you kickstart a personal website that showcases your work as a software developer.

  Language:HTML7.5k12106.7k

• rstudio/shiny

  Easy interactive web applications with R

  Language:R5.4k3342.7k1.9k

• scverse/scanpy

  Single-cell analysis in Python. Scales to >1M cells.

  Language:Python2k491.8k610

• erikgahner/awesome-ggplot2

  A curated list of awesome ggplot2 tutorials, packages etc.

  1.6k4616169

• nf-core/rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Language:Nextflow962159678716

• mdozmorov/scRNA-seq_notes

  A list of scRNA-seq analysis tools

  Language:R657301151

• mdozmorov/MachineLearning_notes

  Machine learning and deep learning resources

  52212178

• theislab/scvelo

  RNA Velocity generalized through dynamical modeling

  Language:Python42213805104

• smorabit/hdWGCNA

  High dimensional weighted gene co-expression network analysis

  Language:R372533336

• theislab/scarches

  Reference mapping for single-cell genomics

  Language:Jupyter Notebook3481217352

• iSEE/iSEE

  R/shiny interface for interactive visualization of data in SummarizedExperiment objects

  Language:R2251820842

• genomicsclass/book

  Compiled and pretty version of labs

  195272129

• harvardinformatics/bioinformatics-coffee-hour

  Short lessons from FAS Informatics coffee hour

  Language:HTML14422048

• drostlab/philentropy

  Information Theory and Distance Quantification with R

  Language:R13593319

• Bioconductor/BiocStickers

  Stickers for some Bioconductor packages - feel free to contribute and/or modify.

  Language:R125155088

• YuLab-SMU/aplot

  Decorate a plot with associated information

  Language:R10272615

• mdozmorov/scATAC-seq_notes

  scATAC-seq data analysis tools and papers

  1013220

• BIMSBbioinfo/compgen2021

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• theislab/AutoGeneS

  Language:Jupyter Notebook576278

• CFeregrino/scWGCNA

  scWGCNA

  Language:HTML5631910

• waldronlab/HGNChelper

  Identify and correct invalid gene symbols

  Language:R567179

• databio/awesome-atac-analysis

  Links to ATAC-seq analysis tools

  522006

• genomicsclass/ph525x

  ph525x. functions only, no data

  Language:JavaScript3117040

• NGSchoolEU/ngs19_python_intro

  Introduction to Python3

  Language:Jupyter Notebook1110

• GKild/scRNAseq_course

  EMBL-EBI single cell RNA-seq analysis in R course practicals

  Language:HTML7105

• sccallahan/WARPqpcr

  Provides functionality for analyzing RT-qPCR and ChIP-qPCR data and generating plots of results

  Language:R7121

• Bioconductor/BioC2021

  BioC2021: Where Software and Biology Connect

  Language:CSS611108

• davemcg/awesome_bioinformatics_consultants

  List of Consultants/Companies that provide bioinformatic solutions / services

  5201

• pertzlab/shiny-timecourse-inspector

  Language:R30