AllenInstitute/brain_observatory_qc

Issues

• Regenerating QC with reload=True adds new thresholds that have previously been overridden

  #388 opened 3 months ago by seanmcculloch
  1

• Dev-QC: slice off first frame of encoder wheel plots

  #332 opened 3 months ago by arielleleon
  4

• qc module status change if metrics and/or plots missing

  #369 opened 3 months ago by DowntonCrabby
  3

• Report Status not updating correctly when status changes via manual override

  #387 opened 3 months ago by seanmcculloch
  2

• omFISH Containers not Generating

  #407 opened 6 months ago by samiamseid
  2

• Some new mongdb qc_submit entries missing required fields

  #408 opened 6 months ago by DowntonCrabby
  0

• New Tag: Phase adjustment

  #406 opened 8 months ago by samiamseid
  0

• Module Deployment Inconsistent Between Projects

  #399 opened 10 months ago by samiamseid
  5

• Brain Health and Window Clarity: Duplicated Images

  #394 opened a year ago by samiamseid
  5

• Dev-QC: Add information flag to the controlled language tag

  #328 opened 7 months ago by arielleleon
  2

• omFISHRbp4Meso Crosstalk Tag

  #365 opened 7 months ago by samiamseid
  4

• Pull valid QC logs from Dev DB

  #389 opened 9 months ago by seanmcculloch
  3

• Stimulus QC Needs "Regimen Version" Information

  #400 opened 10 months ago by samiamseid
  5

• Dev-QC: Move controlled language tag from FOV Integrity to Full Field Module

  #327 opened 9 months ago by arielleleon
  4

• Correct the impacted data stream field in qc logs

  #392 opened 9 months ago by DowntonCrabby
  1

• Increase frequency of behavior report generation

  #390 opened 9 months ago by seanmcculloch
  1

• New Wheel Encoder tag

  #378 opened a year ago by samiamseid
  5

• Add tag for abnormal activity in full field fluorescence plot

  #366 opened a year ago by matchings
  2

• Dev-QC: Other reports for the parent session need consistent labeling

  #325 opened a year ago by arielleleon
  0

• Documentation for QC LIMS usage:

  #386 opened a year ago by seanmcculloch
  0

• Saturation Metric (number of saturated pixels) only checks first 500 frames

  #385 opened a year ago by seanmcculloch
  4

• paired plane, plane assignments not working as expected

  #375 opened a year ago by DowntonCrabby
  2

• Test issue.

  #381 opened a year ago by seanmcculloch
  0

• Dev QC: LIMS Workflow State Link Broken

  #377 opened a year ago by samiamseid
  1

• Detect Cluster of Stimulus Events

  #371 opened a year ago by arielleleon
  0

• Physio intensity drop should be auto-detected

  #372 opened a year ago by arielleleon
  0

• Autodetect the large digital output from the encoder in the first frame of the session

  #373 opened a year ago by arielleleon
  0

• Add additional fields for specific controlled language tags

  #370 opened a year ago by DowntonCrabby
  0

• Replace z-drift metric function with Jinho's newest drift calcuation

  #351 opened a year ago by arielleleon
  3

• Re-evaluate intensity drift (%) metric

  #356 opened a year ago by jkim0731
  4

• Epilepsy detection

  #355 opened a year ago by jkim0731
  2

• Dev-QC: Averaged surface image always missing from session report

  #335 opened a year ago by arielleleon
  2

• BUG: Controlled Language Tags in Lick detection Module are displayed as blank

  #342 opened a year ago by DowntonCrabby
  3

• Mesoscope Saturation Threshold update

  #361 opened a year ago by samiamseid
  3

• Dev-QC: System test check list

  #323 opened a year ago by arielleleon
  1

• Dev-QC: excessive motion frames does not trigger flag

  #333 opened a year ago by arielleleon
  1

• Dev-QC: Intensity drift does not flag properly

  #336 opened a year ago by arielleleon
  1

• Dev-QC: History table breaks when a new flag is added

  #334 opened a year ago by arielleleon
  0

• Dev-QC: Module state only updates on last status update

  #324 opened a year ago by arielleleon
  1

• Dev-QC: Session report needs to update after experiment report has been submitted

  #340 opened a year ago by arielleleon
  0

• Dev-QC: Complete QC button does not detect completion of QC

  #341 opened a year ago by arielleleon
  0

• Set up cron job on legacy mindscope_qc_metrics

  #345 opened a year ago by arielleleon
  0

• System Documentation

  #344 opened a year ago by arielleleon
  0

• Dev-QC: Non-zero event probability should prompt a failure

  #329 opened a year ago by arielleleon
  2

• Dev-QC: Time series shuffled between planes should be a fail not a flag

  #326 opened a year ago by arielleleon
  1

• Dev-QC: other controlled language tag should have a fail button

  #338 opened a year ago by arielleleon
  2

• Dev-QC: Remove Lick Detection report module for active sessions

  #330 opened a year ago by arielleleon
  2

• Dev-QC: Include mouse progression chart in the session level report

  #331 opened a year ago by arielleleon
  0

• Dev-QC: uncorrected motion tag should be raised to fail level flag

  #339 opened a year ago by arielleleon
  2

• Dev-QC: Reorder the z drift report modules

  #337 opened a year ago by arielleleon
  0